RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CHMP4CQ96CF2 233 aa18.64■□□□□ 0.57
CHD3-215ENST00000572750 CNNM2Q9H8M5 875 aa18.64■□□□□ 0.57
CHD3-215ENST00000572750 SPDYE16A6NNV3 312 aaPredicted RBP18.63■□□□□ 0.57
CHD3-215ENST00000572750 E7EWF7 191 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 CTGFP29279 349 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 GCLCP48506 637 aaPredicted RBP18.63■□□□□ 0.57
CHD3-215ENST00000572750 FAM110CQ1W6H9 321 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 POTEEQ6S8J3 1075 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 SAMD1Q6SPF0 538 aaPredicted RBP18.63■□□□□ 0.57
CHD3-215ENST00000572750 GMCL1P1Q8NEA9 526 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 MKL1Q969V6 931 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 PAGR1Q9BTK6 254 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 KRT23Q9C075 422 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 TXNRD2Q9NNW7 524 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 FBXO28Q9NVF7 368 aa18.63■□□□□ 0.57
CHD3-215ENST00000572750 SPTBN5Q9NRC6 3674 aaKnown RBP18.62■□□□□ 0.57
CHD3-215ENST00000572750 SLC27A2O14975 620 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 FLOT1O75955 427 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 NOVP48745 357 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 TCP11L1Q9NUJ3 509 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 SYNPO2Q9UMS6 1093 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 MTMR7Q9Y216 660 aa18.62■□□□□ 0.57
CHD3-215ENST00000572750 TNKSO95271 1327 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 NECTIN1Q15223 517 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 SLFN13Q68D06 897 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 RCSD1Q6JBY9 416 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 CYB5R4Q7L1T6 521 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 RALYLQ86SE5 291 aaKnown RBP18.61■□□□□ 0.57
CHD3-215ENST00000572750 TMEM47Q9BQJ4 181 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 PRO3102Q9H379 93 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 ZSWIM5Q9P217 1185 aa18.61■□□□□ 0.57
CHD3-215ENST00000572750 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
CHD3-215ENST00000572750 TOP1P11387 765 aaKnown RBP18.6■□□□□ 0.57
CHD3-215ENST00000572750 NT5C2P49902 561 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 TRDNQ13061 729 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 KIF22Q14807 665 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 IQCA1Q86XH1 822 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
CHD3-215ENST00000572750 ATG4CQ96DT6 458 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 TRIM47Q96LD4 638 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 ZSCAN10Q96SZ4 725 aaPredicted RBP18.6■□□□□ 0.57
CHD3-215ENST00000572750 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 MORF4L1Q9UBU8 362 aa18.6■□□□□ 0.57
CHD3-215ENST00000572750 CNMDO75829 334 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 PSMC4P43686 418 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 ERVK-24P63145 666 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 COG2Q14746 738 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 LBX2Q6XYB7 198 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 NCOA7Q8NI08 942 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 GTF3C2Q8WUA4 911 aaPredicted RBP18.59■□□□□ 0.57
CHD3-215ENST00000572750 UBAC1Q9BSL1 405 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 EFCC1Q9HA90 598 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 BTBD7Q9P203 1132 aa18.59■□□□□ 0.57
CHD3-215ENST00000572750 FMNL1O95466 1100 aaPredicted RBP18.58■□□□□ 0.56
CHD3-215ENST00000572750 MCCP23508 829 aa18.58■□□□□ 0.56
CHD3-215ENST00000572750 DSG3P32926 999 aa18.58■□□□□ 0.56
CHD3-215ENST00000572750 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
CHD3-215ENST00000572750 CHST3Q7LGC8 479 aa18.58■□□□□ 0.56
CHD3-215ENST00000572750 MB21D2Q8IYB1 491 aaPredicted RBP18.58■□□□□ 0.56
CHD3-215ENST00000572750 GPRC5AQ8NFJ5 357 aa18.58■□□□□ 0.56
CHD3-215ENST00000572750 GMCL1Q96IK5 515 aa18.58■□□□□ 0.56
CHD3-215ENST00000572750 PPP1R9AQ9ULJ8 1098 aa18.58■□□□□ 0.56
CHD3-215ENST00000572750 PLXNB2O15031 1838 aa18.58■□□□□ 0.56
CHD3-215ENST00000572750 MYPNQ86TC9 1320 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 REC8O95072 547 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 BMP3P12645 472 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 SLC1A4P43007 532 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 FCGRTP55899 365 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 CCDC96Q2M329 555 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 RNF20Q5VTR2 975 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 KCTD1Q719H9 257 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 RABGAP1Q9Y3P9 1069 aa18.57■□□□□ 0.56
CHD3-215ENST00000572750 DOCK3Q8IZD9 2030 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 SOX1O00570 391 aaPredicted RBP18.56■□□□□ 0.56
CHD3-215ENST00000572750 TNPO2O14787 897 aaKnown RBP18.56■□□□□ 0.56
CHD3-215ENST00000572750 ANTXR2P58335 489 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 Q3C1V9 767 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 DGKHQ86XP1 1220 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 RASEFQ8IZ41 740 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 TTC14Q96N46 770 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 TMEM106CQ9BVX2 250 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 PORCNQ9H237 461 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 HOXC10Q9NYD6 342 aa18.56■□□□□ 0.56
CHD3-215ENST00000572750 FRMPD2Q68DX3 1309 aaPredicted RBP18.55■□□□□ 0.56
CHD3-215ENST00000572750 TMEM232C9JQI7 657 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 MYCP01106 439 aaPredicted RBP18.55■□□□□ 0.56
CHD3-215ENST00000572750 STAT2P52630 851 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 IKQ13123 557 aaPredicted RBP18.55■□□□□ 0.56
CHD3-215ENST00000572750 SEC23AQ15436 765 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 IFIT1BQ5T764 474 aaKnown RBP18.55■□□□□ 0.56
CHD3-215ENST00000572750 PNMA1Q8ND90 353 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 DCAF4Q8WV16 495 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 KIFC2Q96AC6 838 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 KAT14Q9H8E8 782 aa18.55■□□□□ 0.56
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