RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 DPP9Q86TI2 863 aa20.7■□□□□ 0.9
LITAF-211ENST00000572255 NCAPG2Q86XI2 1143 aa20.7■□□□□ 0.9
LITAF-211ENST00000572255 RBM27Q9P2N5 1060 aaKnown RBP20.7■□□□□ 0.9
LITAF-211ENST00000572255 MYH4Q9Y623 1939 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 CYP2C19P33261 490 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 TMEM132BQ14DG7 1078 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 ZMYM1Q5SVZ6 1142 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 FAM83BQ5T0W9 1011 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 IFNL3Q8IZI9 196 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 NYAP2Q9P242 653 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 ADAMTS5Q9UNA0 930 aa20.69■□□□□ 0.9
LITAF-211ENST00000572255 PRDM1O75626 825 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 IGHA2P01877 340 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 HDAC1Q13547 482 aaPredicted RBP20.68■□□□□ 0.9
LITAF-211ENST00000572255 C7orf61Q8IZ16 206 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 NACAP1Q9BZK3 213 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 PRO3102Q9H379 93 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 ZNF287Q9HBT7 754 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 PCDH10Q9P2E7 1040 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 PPP1R9AQ9ULJ8 1098 aa20.68■□□□□ 0.9
LITAF-211ENST00000572255 ZNFX1Q9P2E3 1918 aaKnown RBP20.67■□□□□ 0.9
LITAF-211ENST00000572255 IGKV6D-41A0A0C4DH26 115 aa20.67■□□□□ 0.9
LITAF-211ENST00000572255 COBLO75128 1261 aa20.67■□□□□ 0.9
LITAF-211ENST00000572255 CNGA1P29973 690 aa20.67■□□□□ 0.9
LITAF-211ENST00000572255 OLFML2BQ68BL8 750 aa20.67■□□□□ 0.9
LITAF-211ENST00000572255 ZNF444Q8N0Y2 327 aaPredicted RBP20.67■□□□□ 0.9
LITAF-211ENST00000572255 ABRAQ8N0Z2 381 aa20.67■□□□□ 0.9
LITAF-211ENST00000572255 NUP88Q99567 741 aaPredicted RBP20.67■□□□□ 0.9
LITAF-211ENST00000572255 PFASO15067 1338 aa20.67■□□□□ 0.9
LITAF-211ENST00000572255 F5H6K3 240 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 VWA5AO00534 786 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 SLC25A27O95847 323 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 COL6A1P12109 1028 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 KLRC3Q07444 240 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 TRPV1Q8NER1 839 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 NAPBQ9H115 298 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 SLC5A4Q9NY91 659 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 CLIP2Q9UDT6 1046 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 STAP2Q9UGK3 403 aa20.66■□□□□ 0.9
LITAF-211ENST00000572255 DDX20Q9UHI6 824 aaKnown RBP20.66■□□□□ 0.9
LITAF-211ENST00000572255 MSCO60682 206 aa20.65■□□□□ 0.9
LITAF-211ENST00000572255 NDUFB10O96000 172 aa20.65■□□□□ 0.9
LITAF-211ENST00000572255 FCER1AP12319 257 aa20.65■□□□□ 0.9
LITAF-211ENST00000572255 CYBAP13498 195 aa20.65■□□□□ 0.9
LITAF-211ENST00000572255 RIOX2Q8IUF8 465 aa20.65■□□□□ 0.9
LITAF-211ENST00000572255 STAT3P40763 770 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 PDE1AP54750 535 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 PDE4BQ07343 736 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 PPARAQ07869 468 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 REPS2Q8NFH8 660 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 SLF1Q9BQI6 1058 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 MTMR4Q9NYA4 1195 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 ZNF214Q9UL59 606 aaPredicted RBP20.64■□□□□ 0.89
LITAF-211ENST00000572255 ZMYND8Q9ULU4 1186 aaPredicted RBP20.64■□□□□ 0.89
LITAF-211ENST00000572255 DNAH12Q6ZR08 3092 aa20.64■□□□□ 0.89
LITAF-211ENST00000572255 PLIN4Q96Q06 1357 aa20.63■□□□□ 0.89
LITAF-211ENST00000572255 FOXP2O15409 715 aa20.63■□□□□ 0.89
LITAF-211ENST00000572255 SLC3A2P08195 630 aaKnown RBP20.63■□□□□ 0.89
LITAF-211ENST00000572255 MKL1Q969V6 931 aa20.63■□□□□ 0.89
LITAF-211ENST00000572255 EVI5LQ96CN4 794 aa20.63■□□□□ 0.89
LITAF-211ENST00000572255 MAML3Q96JK9 1138 aa20.63■□□□□ 0.89
LITAF-211ENST00000572255 MMP19Q99542 508 aa20.63■□□□□ 0.89
LITAF-211ENST00000572255 PLXNA1Q9UIW2 1896 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 TTLL1O95922 423 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 TSPY3P0CV98 308 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 TSPY8P0CW00 308 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 COPB2P35606 906 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 AAMPQ13685 434 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 NEDD1Q8NHV4 660 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 SYNPO2Q9UMS6 1093 aa20.62■□□□□ 0.89
LITAF-211ENST00000572255 TFAP4Q01664 338 aa20.61■□□□□ 0.89
LITAF-211ENST00000572255 KCTD2Q14681 263 aa20.61■□□□□ 0.89
LITAF-211ENST00000572255 LRRC26Q2I0M4 334 aa20.61■□□□□ 0.89
LITAF-211ENST00000572255 FAM47AQ5JRC9 791 aa20.61■□□□□ 0.89
LITAF-211ENST00000572255 LRRC47Q8N1G4 583 aaKnown RBP20.61■□□□□ 0.89
LITAF-211ENST00000572255 PRPF38AQ8NAV1 312 aaKnown RBP20.61■□□□□ 0.89
LITAF-211ENST00000572255 TEX13BQ9BXU2 312 aa20.61■□□□□ 0.89
LITAF-211ENST00000572255 A0A1W2PPC1 479 aa20.6■□□□□ 0.89
LITAF-211ENST00000572255 SEPT4O43236 478 aa20.6■□□□□ 0.89
LITAF-211ENST00000572255 PGK2P07205 417 aa20.6■□□□□ 0.89
LITAF-211ENST00000572255 SYN1P17600 705 aa20.6■□□□□ 0.89
LITAF-211ENST00000572255 PRAMEF19Q5SWL8 479 aa20.6■□□□□ 0.89
LITAF-211ENST00000572255 GMCL1P1Q8NEA9 526 aa20.6■□□□□ 0.89
LITAF-211ENST00000572255 GDF15Q99988 308 aa20.6■□□□□ 0.89
LITAF-211ENST00000572255 DNM1LO00429 736 aa20.59■□□□□ 0.89
LITAF-211ENST00000572255 VPS53Q5VIR6 699 aa20.59■□□□□ 0.89
LITAF-211ENST00000572255 ANO1Q5XXA6 986 aa20.59■□□□□ 0.89
LITAF-211ENST00000572255 SNRNP48Q6IEG0 339 aaKnown RBP20.59■□□□□ 0.89
LITAF-211ENST00000572255 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
LITAF-211ENST00000572255 SENP6Q9GZR1 1112 aaPredicted RBP20.59■□□□□ 0.89
LITAF-211ENST00000572255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
LITAF-211ENST00000572255 ZBED4O75132 1171 aa20.58■□□□□ 0.89
LITAF-211ENST00000572255 CTDSPL2Q05D32 466 aa20.58■□□□□ 0.89
LITAF-211ENST00000572255 ZNF792Q3KQV3 632 aa20.58■□□□□ 0.89
LITAF-211ENST00000572255 SLFN13Q68D06 897 aa20.58■□□□□ 0.89
LITAF-211ENST00000572255 KIFC2Q96AC6 838 aa20.58■□□□□ 0.89
LITAF-211ENST00000572255 HELLSQ9NRZ9 838 aa20.58■□□□□ 0.89
LITAF-211ENST00000572255 FEM1BQ9UK73 627 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms