RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TTF1Q15361 905 aaPredicted RBP24.02■■□□□ 1.44
CCDC40-206ENST00000572083 LENG1Q96BZ8 264 aaPredicted RBP24.02■■□□□ 1.44
CCDC40-206ENST00000572083 MMP19Q99542 508 aa24.02■■□□□ 1.44
CCDC40-206ENST00000572083 SWAP70Q9UH65 585 aa24.02■■□□□ 1.44
CCDC40-206ENST00000572083 TMX2Q9Y320 296 aa24.02■■□□□ 1.44
CCDC40-206ENST00000572083 TACC3Q9Y6A5 838 aa24.02■■□□□ 1.44
CCDC40-206ENST00000572083 ZNFX1Q9P2E3 1918 aaKnown RBP24.02■■□□□ 1.44
CCDC40-206ENST00000572083 SMCHD1A6NHR9 2005 aa24.01■■□□□ 1.43
CCDC40-206ENST00000572083 PLXNA1Q9UIW2 1896 aa24.01■■□□□ 1.43
CCDC40-206ENST00000572083 TAL1P17542 331 aaPredicted RBP24.01■■□□□ 1.43
CCDC40-206ENST00000572083 RNF180Q86T96 592 aa24.01■■□□□ 1.43
CCDC40-206ENST00000572083 ERC1Q8IUD2 1116 aa24.01■■□□□ 1.43
CCDC40-206ENST00000572083 DNAJC2Q99543 621 aaKnown RBP24.01■■□□□ 1.43
CCDC40-206ENST00000572083 SH2D4AQ9H788 454 aa24.01■■□□□ 1.43
CCDC40-206ENST00000572083 ARMT1Q9H993 441 aa24.01■■□□□ 1.43
CCDC40-206ENST00000572083 A0A1W2PQ45 241 aaPredicted RBP24■■□□□ 1.43
CCDC40-206ENST00000572083 A0A1W2PQY0 241 aa24■■□□□ 1.43
CCDC40-206ENST00000572083 TCRBV5S4A2TA0A5A2 114 aa24■■□□□ 1.43
CCDC40-206ENST00000572083 GOLIM4O00461 696 aa24■■□□□ 1.43
CCDC40-206ENST00000572083 WDR46O15213 610 aaKnown RBP24■■□□□ 1.43
CCDC40-206ENST00000572083 RAG1P15918 1043 aa24■■□□□ 1.43
CCDC40-206ENST00000572083 PRDM6Q9NQX0 595 aa24■■□□□ 1.43
CCDC40-206ENST00000572083 FBXO28Q9NVF7 368 aa24■■□□□ 1.43
CCDC40-206ENST00000572083 NRBP1Q9UHY1 535 aa24■■□□□ 1.43
CCDC40-206ENST00000572083 SMIM22K7EJ46 135 aa23.99■■□□□ 1.43
CCDC40-206ENST00000572083 SLC25A27O95847 323 aa23.99■■□□□ 1.43
CCDC40-206ENST00000572083 TINF2Q9BSI4 451 aa23.99■■□□□ 1.43
CCDC40-206ENST00000572083 ROBO3Q96MS0 1386 aa23.99■■□□□ 1.43
CCDC40-206ENST00000572083 TTC28Q96AY4 2481 aa23.99■■□□□ 1.43
CCDC40-206ENST00000572083 BAZ2AQ9UIF9 1905 aaKnown RBP23.98■■□□□ 1.43
CCDC40-206ENST00000572083 TMEM265A0A087WTH1 108 aa23.98■■□□□ 1.43
CCDC40-206ENST00000572083 KIAA0355O15063 1070 aa23.98■■□□□ 1.43
CCDC40-206ENST00000572083 PRKAB2O43741 272 aa23.98■■□□□ 1.43
CCDC40-206ENST00000572083 FPGSQ05932 587 aa23.98■■□□□ 1.43
CCDC40-206ENST00000572083 TMEM39AQ9NV64 488 aa23.98■■□□□ 1.43
CCDC40-206ENST00000572083 CYP2D7A0A087X1C5 515 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 KCTD2Q14681 263 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 GRIN2CQ14957 1233 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 ZNF792Q3KQV3 632 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 SLFNL1Q499Z3 407 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 RIOX2Q8IUF8 465 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 USP38Q8NB14 1042 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 RHPN1Q8TCX5 695 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 BCL11AQ9H165 835 aa23.97■■□□□ 1.43
CCDC40-206ENST00000572083 CCER2I3L3R5 266 aa23.96■■□□□ 1.43
CCDC40-206ENST00000572083 MBD4O95243 580 aa23.96■■□□□ 1.43
CCDC40-206ENST00000572083 ZNF865P0CJ78 1059 aaPredicted RBP23.96■■□□□ 1.43
CCDC40-206ENST00000572083 AKR1A1P14550 325 aa23.96■■□□□ 1.43
CCDC40-206ENST00000572083 DNAJB2P25686 324 aa23.96■■□□□ 1.43
CCDC40-206ENST00000572083 APBB1O00213 710 aa23.95■■□□□ 1.42
CCDC40-206ENST00000572083 RAD21O60216 631 aa23.95■■□□□ 1.42
CCDC40-206ENST00000572083 ADAMTS4O75173 837 aa23.95■■□□□ 1.42
CCDC40-206ENST00000572083 EEF2P13639 858 aaKnown RBP23.95■■□□□ 1.42
CCDC40-206ENST00000572083 CDK8P49336 464 aa23.95■■□□□ 1.42
CCDC40-206ENST00000572083 FAAP100Q0VG06 881 aa23.95■■□□□ 1.42
CCDC40-206ENST00000572083 SYMPKQ92797 1274 aaKnown RBP23.95■■□□□ 1.42
CCDC40-206ENST00000572083 ADAMTS5Q9UNA0 930 aa23.95■■□□□ 1.42
CCDC40-206ENST00000572083 SYNRGQ9UMZ2 1314 aa23.94■■□□□ 1.42
CCDC40-206ENST00000572083 VWA5AO00534 786 aa23.94■■□□□ 1.42
CCDC40-206ENST00000572083 STAT3P40763 770 aa23.94■■□□□ 1.42
CCDC40-206ENST00000572083 STARD7Q9NQZ5 370 aa23.94■■□□□ 1.42
CCDC40-206ENST00000572083 ZNF214Q9UL59 606 aaPredicted RBP23.94■■□□□ 1.42
CCDC40-206ENST00000572083 PPP1R9AQ9ULJ8 1098 aa23.94■■□□□ 1.42
CCDC40-206ENST00000572083 CNPY2Q9Y2B0 182 aa23.94■■□□□ 1.42
CCDC40-206ENST00000572083 DIS3Q9Y2L1 958 aaKnown RBP23.94■■□□□ 1.42
CCDC40-206ENST00000572083 ACLYP53396 1101 aa23.93■■□□□ 1.42
CCDC40-206ENST00000572083 FAM83BQ5T0W9 1011 aa23.93■■□□□ 1.42
CCDC40-206ENST00000572083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.93■■□□□ 1.42
CCDC40-206ENST00000572083 CCDC17Q96LX7 622 aa23.93■■□□□ 1.42
CCDC40-206ENST00000572083 ATP8A2Q9NTI2 1148 aa23.93■■□□□ 1.42
CCDC40-206ENST00000572083 DCDC2CA8MYV0 355 aa23.92■■□□□ 1.42
CCDC40-206ENST00000572083 HSP90AB4PQ58FF6 505 aa23.92■■□□□ 1.42
CCDC40-206ENST00000572083 C12orf60Q5U649 245 aa23.92■■□□□ 1.42
CCDC40-206ENST00000572083 C16orf86Q6ZW13 317 aa23.92■■□□□ 1.42
CCDC40-206ENST00000572083 ANKRD33Q7Z3H0 272 aa23.92■■□□□ 1.42
CCDC40-206ENST00000572083 REPS2Q8NFH8 660 aa23.92■■□□□ 1.42
CCDC40-206ENST00000572083 GOPCQ9HD26 462 aa23.92■■□□□ 1.42
CCDC40-206ENST00000572083 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.91■■□□□ 1.42
CCDC40-206ENST00000572083 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.91■■□□□ 1.42
CCDC40-206ENST00000572083 USP17L12C9JPN9 530 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 USP17L21D6R901 530 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 CHGBP05060 677 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 IFIT2P09913 472 aaKnown RBP23.91■■□□□ 1.42
CCDC40-206ENST00000572083 ADD2P35612 726 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 TJAP1Q5JTD0 557 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 AMOTL1Q8IY63 956 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 CLASRPQ8N2M8 674 aaKnown RBP23.91■■□□□ 1.42
CCDC40-206ENST00000572083 NUP133Q8WUM0 1156 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 TIFAQ96CG3 184 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 TOX2Q96NM4 488 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.42
CCDC40-206ENST00000572083 TSEN34Q9BSV6 310 aaKnown RBP23.91■■□□□ 1.42
CCDC40-206ENST00000572083 ZNF576Q9H609 170 aa23.91■■□□□ 1.42
CCDC40-206ENST00000572083 MYADML2A6NDP7 307 aa23.9■■□□□ 1.42
CCDC40-206ENST00000572083 KANSL2Q9H9L4 492 aa23.9■■□□□ 1.42
CCDC40-206ENST00000572083 PAG1Q9NWQ8 432 aa23.9■■□□□ 1.42
CCDC40-206ENST00000572083 ZHX1Q9UKY1 873 aaPredicted RBP23.9■■□□□ 1.42
CCDC40-206ENST00000572083 CHD9Q3L8U1 2897 aa23.89■■□□□ 1.41
CCDC40-206ENST00000572083 TIMP1P01033 207 aa23.89■■□□□ 1.41
CCDC40-206ENST00000572083 COPB2P35606 906 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms