RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 CLASRPQ8N2M8 674 aaKnown RBP17.26■□□□□ 0.35
CIITA-205ENST00000571186 MAML3Q96JK9 1138 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 SEMA6BQ9H3T3 888 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 TMX2Q9Y320 296 aa17.26■□□□□ 0.35
CIITA-205ENST00000571186 IFIT2P09913 472 aaKnown RBP17.25■□□□□ 0.35
CIITA-205ENST00000571186 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
CIITA-205ENST00000571186 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
CIITA-205ENST00000571186 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
CIITA-205ENST00000571186 MYH7P12883 1935 aa17.25■□□□□ 0.35
CIITA-205ENST00000571186 TRIM43BA6NCK2 446 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 PRKAB2O43741 272 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 SLC25A27O95847 323 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 TLE2Q04725 743 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 TMEM132BQ14DG7 1078 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 SNX17Q15036 470 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 FAM47AQ5JRC9 791 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.24■□□□□ 0.35
CIITA-205ENST00000571186 TRIM43Q96BQ3 446 aaPredicted RBP17.24■□□□□ 0.35
CIITA-205ENST00000571186 KIF1BPQ96EK5 621 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 CCDC17Q96LX7 622 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 MMP19Q99542 508 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
CIITA-205ENST00000571186 PDLIM7Q9NR12 457 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 ATP8A2Q9NTI2 1148 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 VCANP13611 3396 aa17.24■□□□□ 0.35
CIITA-205ENST00000571186 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
CIITA-205ENST00000571186 RAD21O60216 631 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 MBD4O95243 580 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 RARBP10826 455 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 CDK8P49336 464 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 AMOTL1Q8IY63 956 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 CRBNQ96SW2 442 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 XPNPEP3Q9NQH7 507 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
CIITA-205ENST00000571186 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 USP17L21D6R901 530 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 SMIM22K7EJ46 135 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 PGK1P00558 417 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 PGK2P07205 417 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 SMAD3P84022 425 aaKnown RBP17.22■□□□□ 0.35
CIITA-205ENST00000571186 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 C1orf53Q5VUE5 145 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 RNF180Q86T96 592 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 MAFAQ8NHW3 353 aaPredicted RBP17.22■□□□□ 0.35
CIITA-205ENST00000571186 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 FBXO28Q9NVF7 368 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 PAG1Q9NWQ8 432 aa17.22■□□□□ 0.35
CIITA-205ENST00000571186 HMMRO75330 724 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 EEF2P13639 858 aaKnown RBP17.21■□□□□ 0.35
CIITA-205ENST00000571186 ADD2P35612 726 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 STAT3P40763 770 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 KCTD2Q14681 263 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 RIOX2Q8IUF8 465 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 MYLIPQ8WY64 445 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 DDRGK1Q96HY6 314 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 TINF2Q9BSI4 451 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.21■□□□□ 0.35
CIITA-205ENST00000571186 NRBP1Q9UHY1 535 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 PHF24Q9UPV7 400 aa17.21■□□□□ 0.35
CIITA-205ENST00000571186 CDH23Q9H251 3354 aa17.2■□□□□ 0.34
CIITA-205ENST00000571186 CLTBP09497 229 aa17.2■□□□□ 0.34
CIITA-205ENST00000571186 RAG1P15918 1043 aa17.2■□□□□ 0.34
CIITA-205ENST00000571186 TAL1P17542 331 aaPredicted RBP17.2■□□□□ 0.34
CIITA-205ENST00000571186 C16orf86Q6ZW13 317 aa17.2■□□□□ 0.34
CIITA-205ENST00000571186 TTYH1Q9H313 450 aaPredicted RBP17.2■□□□□ 0.34
CIITA-205ENST00000571186 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
CIITA-205ENST00000571186 GOPCQ9HD26 462 aa17.2■□□□□ 0.34
CIITA-205ENST00000571186 DIS3Q9Y2L1 958 aaKnown RBP17.2■□□□□ 0.34
CIITA-205ENST00000571186 MCM3APO60318 1980 aa17.2■□□□□ 0.34
CIITA-205ENST00000571186 VWA5AO00534 786 aa17.19■□□□□ 0.34
CIITA-205ENST00000571186 PQBP1O60828 265 aaKnown RBP17.19■□□□□ 0.34
CIITA-205ENST00000571186 ITGB8P26012 769 aa17.19■□□□□ 0.34
CIITA-205ENST00000571186 ZNF792Q3KQV3 632 aa17.19■□□□□ 0.34
CIITA-205ENST00000571186 RNPC3Q96LT9 517 aaKnown RBP17.19■□□□□ 0.34
CIITA-205ENST00000571186 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
CIITA-205ENST00000571186 A0A1W2PQ45 241 aaPredicted RBP17.18■□□□□ 0.34
CIITA-205ENST00000571186 A0A1W2PQY0 241 aa17.18■□□□□ 0.34
CIITA-205ENST00000571186 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
CIITA-205ENST00000571186 ATP5JP18859 108 aa17.18■□□□□ 0.34
CIITA-205ENST00000571186 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
CIITA-205ENST00000571186 TMEM39AQ9NV64 488 aa17.18■□□□□ 0.34
CIITA-205ENST00000571186 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
CIITA-205ENST00000571186 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
CIITA-205ENST00000571186 MYH4Q9Y623 1939 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 KIAA0355O15063 1070 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 CHGBP05060 677 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 ZNF865P0CJ78 1059 aaPredicted RBP17.17■□□□□ 0.34
CIITA-205ENST00000571186 AKR1A1P14550 325 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 FOSL2P15408 326 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 COPB2P35606 906 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 SLC4A3P48751 1232 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 EPHB4P54760 987 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 CTR9Q6PD62 1173 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 LENG1Q96BZ8 264 aaPredicted RBP17.17■□□□□ 0.34
CIITA-205ENST00000571186 HAUS7Q99871 368 aa17.17■□□□□ 0.34
CIITA-205ENST00000571186 ZNF214Q9UL59 606 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms