RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 NRBP1Q9UHY1 535 aa25.31■■□□□ 1.64
PKD1-240ENST00000570253 RLFQ13129 1914 aa25.31■■□□□ 1.64
PKD1-240ENST00000570253 MYH7P12883 1935 aa25.3■■□□□ 1.64
PKD1-240ENST00000570253 IGHA2P01877 340 aa25.3■■□□□ 1.64
PKD1-240ENST00000570253 CLEC10AQ8IUN9 316 aa25.3■■□□□ 1.64
PKD1-240ENST00000570253 ARPP21Q9UBL0 812 aaPredicted RBP25.3■■□□□ 1.64
PKD1-240ENST00000570253 RARBP10826 455 aa25.29■■□□□ 1.64
PKD1-240ENST00000570253 EEF2P13639 858 aaKnown RBP25.29■■□□□ 1.64
PKD1-240ENST00000570253 KIAA1755Q5JYT7 1200 aa25.29■■□□□ 1.64
PKD1-240ENST00000570253 ZNF697Q5TEC3 545 aa25.29■■□□□ 1.64
PKD1-240ENST00000570253 TMEM132BQ14DG7 1078 aa25.28■■□□□ 1.64
PKD1-240ENST00000570253 RNF180Q86T96 592 aa25.28■■□□□ 1.64
PKD1-240ENST00000570253 RIOX2Q8IUF8 465 aa25.28■■□□□ 1.64
PKD1-240ENST00000570253 LRRCC1Q9C099 1032 aa25.28■■□□□ 1.64
PKD1-240ENST00000570253 DNAH12Q6ZR08 3092 aa25.28■■□□□ 1.64
PKD1-240ENST00000570253 CYP2D7A0A087X1C5 515 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 STAT3P40763 770 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 ADCYAP1R1P41586 468 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 LRRC41Q15345 812 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 PRAMEF19Q5SWL8 479 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 SIAH1Q8IUQ4 282 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 SIRT2Q8IXJ6 389 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 XPNPEP3Q9NQH7 507 aa25.27■■□□□ 1.64
PKD1-240ENST00000570253 DIS3Q9Y2L1 958 aaKnown RBP25.27■■□□□ 1.64
PKD1-240ENST00000570253 CTDP1Q9Y5B0 961 aaPredicted RBP25.27■■□□□ 1.64
PKD1-240ENST00000570253 ZNFX1Q9P2E3 1918 aaKnown RBP25.27■■□□□ 1.64
PKD1-240ENST00000570253 TRIM60Q495X7 471 aa25.26■■□□□ 1.63
PKD1-240ENST00000570253 FAM47AQ5JRC9 791 aa25.26■■□□□ 1.63
PKD1-240ENST00000570253 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
PKD1-240ENST00000570253 FERMT2Q96AC1 680 aa25.26■■□□□ 1.63
PKD1-240ENST00000570253 GPATCH3Q96I76 525 aa25.26■■□□□ 1.63
PKD1-240ENST00000570253 PPP1R9AQ9ULJ8 1098 aa25.26■■□□□ 1.63
PKD1-240ENST00000570253 CNPY2Q9Y2B0 182 aa25.26■■□□□ 1.63
PKD1-240ENST00000570253 PARP14Q460N5 1801 aa25.26■■□□□ 1.63
PKD1-240ENST00000570253 POTEB2H3BUK9 544 aa25.25■■□□□ 1.63
PKD1-240ENST00000570253 CTR9Q6PD62 1173 aa25.25■■□□□ 1.63
PKD1-240ENST00000570253 TINF2Q9BSI4 451 aa25.25■■□□□ 1.63
PKD1-240ENST00000570253 MKNK2Q9HBH9 465 aa25.25■■□□□ 1.63
PKD1-240ENST00000570253 COL11A1P12107 1806 aaPredicted RBP25.25■■□□□ 1.63
PKD1-240ENST00000570253 LTBP2Q14767 1821 aa25.25■■□□□ 1.63
PKD1-240ENST00000570253 VWA5AO00534 786 aa25.24■■□□□ 1.63
PKD1-240ENST00000570253 SNX17Q15036 470 aa25.24■■□□□ 1.63
PKD1-240ENST00000570253 SLFNL1Q499Z3 407 aa25.24■■□□□ 1.63
PKD1-240ENST00000570253 FAM83BQ5T0W9 1011 aa25.24■■□□□ 1.63
PKD1-240ENST00000570253 C1orf53Q5VUE5 145 aa25.24■■□□□ 1.63
PKD1-240ENST00000570253 ZNF287Q9HBT7 754 aa25.24■■□□□ 1.63
PKD1-240ENST00000570253 ADAMTS5Q9UNA0 930 aa25.24■■□□□ 1.63
PKD1-240ENST00000570253 AKR1A1P14550 325 aa25.23■■□□□ 1.63
PKD1-240ENST00000570253 BADQ92934 168 aa25.23■■□□□ 1.63
PKD1-240ENST00000570253 PDLIM7Q9NR12 457 aa25.23■■□□□ 1.63
PKD1-240ENST00000570253 FBXO28Q9NVF7 368 aa25.23■■□□□ 1.63
PKD1-240ENST00000570253 PLXNA1Q9UIW2 1896 aa25.22■■□□□ 1.63
PKD1-240ENST00000570253 PGK2P07205 417 aa25.22■■□□□ 1.63
PKD1-240ENST00000570253 DDX11Q96FC9 970 aa25.22■■□□□ 1.63
PKD1-240ENST00000570253 FAM161BQ96MY7 647 aa25.22■■□□□ 1.63
PKD1-240ENST00000570253 SLF1Q9BQI6 1058 aa25.22■■□□□ 1.63
PKD1-240ENST00000570253 PUS7LQ9H0K6 701 aaKnown RBP25.22■■□□□ 1.63
PKD1-240ENST00000570253 PHF24Q9UPV7 400 aa25.22■■□□□ 1.63
PKD1-240ENST00000570253 TACC3Q9Y6A5 838 aa25.22■■□□□ 1.63
PKD1-240ENST00000570253 ZNF792Q3KQV3 632 aa25.21■■□□□ 1.63
PKD1-240ENST00000570253 GIMAP6Q6P9H5 292 aa25.21■■□□□ 1.63
PKD1-240ENST00000570253 TEX13BQ9BXU2 312 aa25.21■■□□□ 1.63
PKD1-240ENST00000570253 ECHDC1Q9NTX5 307 aa25.21■■□□□ 1.63
PKD1-240ENST00000570253 ROBO3Q96MS0 1386 aa25.2■■□□□ 1.63
PKD1-240ENST00000570253 CLTBP09497 229 aa25.2■■□□□ 1.62
PKD1-240ENST00000570253 SHHQ15465 462 aa25.2■■□□□ 1.62
PKD1-240ENST00000570253 LRRFIP1Q32MZ4 808 aaKnown RBP25.2■■□□□ 1.62
PKD1-240ENST00000570253 SBK1Q52WX2 424 aa25.2■■□□□ 1.62
PKD1-240ENST00000570253 MSL3Q8N5Y2 521 aaKnown RBP25.2■■□□□ 1.62
PKD1-240ENST00000570253 ZNF214Q9UL59 606 aaPredicted RBP25.2■■□□□ 1.62
PKD1-240ENST00000570253 MINDY4BA8MYZ0 360 aa25.19■■□□□ 1.62
PKD1-240ENST00000570253 ZBED4O75132 1171 aa25.19■■□□□ 1.62
PKD1-240ENST00000570253 TLE2Q04725 743 aa25.19■■□□□ 1.62
PKD1-240ENST00000570253 SNRNP48Q6IEG0 339 aaKnown RBP25.19■■□□□ 1.62
PKD1-240ENST00000570253 GUCD1Q96NT3 240 aa25.19■■□□□ 1.62
PKD1-240ENST00000570253 NYAP2Q9P242 653 aa25.19■■□□□ 1.62
PKD1-240ENST00000570253 RCAN3Q9UKA8 241 aa25.19■■□□□ 1.62
PKD1-240ENST00000570253 SMIM22K7EJ46 135 aa25.18■■□□□ 1.62
PKD1-240ENST00000570253 PGK1P00558 417 aa25.18■■□□□ 1.62
PKD1-240ENST00000570253 RAG1P15918 1043 aa25.18■■□□□ 1.62
PKD1-240ENST00000570253 GNAT2P19087 354 aa25.18■■□□□ 1.62
PKD1-240ENST00000570253 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.18■■□□□ 1.62
PKD1-240ENST00000570253 ZNF444Q8N0Y2 327 aaPredicted RBP25.18■■□□□ 1.62
PKD1-240ENST00000570253 PRPF38AQ8NAV1 312 aaKnown RBP25.18■■□□□ 1.62
PKD1-240ENST00000570253 NUP133Q8WUM0 1156 aa25.18■■□□□ 1.62
PKD1-240ENST00000570253 FAM184BQ9ULE4 1060 aa25.18■■□□□ 1.62
PKD1-240ENST00000570253 SMCHD1A6NHR9 2005 aa25.18■■□□□ 1.62
PKD1-240ENST00000570253 ZFYP08048 801 aaPredicted RBP25.17■■□□□ 1.62
PKD1-240ENST00000570253 SLC4A3P48751 1232 aa25.17■■□□□ 1.62
PKD1-240ENST00000570253 TDO2P48775 406 aa25.17■■□□□ 1.62
PKD1-240ENST00000570253 SMAD3P84022 425 aaKnown RBP25.17■■□□□ 1.62
PKD1-240ENST00000570253 STK11IPQ8N1F8 1099 aa25.17■■□□□ 1.62
PKD1-240ENST00000570253 STRBPQ96SI9 672 aaKnown RBP25.17■■□□□ 1.62
PKD1-240ENST00000570253 TSEN34Q9BSV6 310 aaKnown RBP25.17■■□□□ 1.62
PKD1-240ENST00000570253 A0A0C4DFX4 3053 aa25.17■■□□□ 1.62
PKD1-240ENST00000570253 SYNGAP1Q96PV0 1343 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 CUL9Q8IWT3 2517 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 A0A1W2PQ45 241 aaPredicted RBP25.16■■□□□ 1.62
PKD1-240ENST00000570253 A0A1W2PQY0 241 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 F5H6K3 240 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms