RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PDE4BQ07343 736 aa20.37■□□□□ 0.85
MAP1LC3B-208ENST00000570189 HABP4Q5JVS0 413 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NECAB2Q7Z6G3 386 aa20.37■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NAPBQ9H115 298 aa20.37■□□□□ 0.85
MAP1LC3B-208ENST00000570189 HELLSQ9NRZ9 838 aa20.37■□□□□ 0.85
MAP1LC3B-208ENST00000570189 SLC3A2P08195 630 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 COPB2P35606 906 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 PPARAQ07869 468 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 MFSD14CQ5VZR4 134 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 LHX8Q68G74 356 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ZNF444Q8N0Y2 327 aaPredicted RBP20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 REPS2Q8NFH8 660 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NEDD1Q8NHV4 660 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 DPF3Q92784 378 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 PAWRQ96IZ0 340 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 MTMR4Q9NYA4 1195 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 FLRT1Q9NZU1 646 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NR2E3Q9Y5X4 410 aa20.36■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ZMYM6O95789 1325 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 VWA5AO00534 786 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ADORA2AP29274 412 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ATP2B2Q01814 1243 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 TMEM132BQ14DG7 1078 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ALX1Q15699 326 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 WDR78Q5VTH9 848 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 RIOX2Q8IUF8 465 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 GMCL1P1Q8NEA9 526 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NPLOC4Q8TAT6 608 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NBPF3Q9H094 633 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 OSBPL3Q9H4L5 887 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 SLC5A4Q9NY91 659 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ANAPC4Q9UJX5 808 aa20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ZNF214Q9UL59 606 aaPredicted RBP20.35■□□□□ 0.85
MAP1LC3B-208ENST00000570189 F5H6K3 240 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 MSCO60682 206 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 TTLL1O95922 423 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 KLRC3Q07444 240 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 PPP4R3BQ5MIZ7 849 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 FAM83BQ5T0W9 1011 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 DIS3LQ8TF46 1054 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 CEP95Q96GE4 821 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 FBXO28Q9NVF7 368 aa20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.34■□□□□ 0.85
MAP1LC3B-208ENST00000570189 ATP2A1O14983 1001 aa20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NDUFB10O96000 172 aa20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 FGRP09769 529 aa20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 COL6A1P12109 1028 aa20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 CCND3P30281 292 aaPredicted RBP20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 NUCB1Q02818 461 aa20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 SLF1Q9BQI6 1058 aa20.33■□□□□ 0.85
MAP1LC3B-208ENST00000570189 COBLO75128 1261 aa20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 PRDM1O75626 825 aa20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 CYBAP13498 195 aa20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 DPP9Q86TI2 863 aa20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 PRPF38AQ8NAV1 312 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 LNPKQ9C0E8 428 aa20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 PRO3102Q9H379 93 aa20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 CLIP2Q9UDT6 1046 aa20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 DIS3Q9Y2L1 958 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 RANBP2P49792 3224 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-208ENST00000570189 TSPY3P0CV98 308 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 TSPY8P0CW00 308 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 FCER1AP12319 257 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 STAT3P40763 770 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 NOVP48745 357 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 PLS1Q14651 629 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 MCMDC2Q4G0Z9 681 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 NCAPG2Q86XI2 1143 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 C11orf49Q9H6J7 331 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 NRBP1Q9UHY1 535 aa20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 COLQQ9Y215 455 aaPredicted RBP20.31■□□□□ 0.84
MAP1LC3B-208ENST00000570189 LAMA4Q16363 1823 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 EVI5O60447 810 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 IGHDP01880 384 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 CCDC129Q6ZRS4 1044 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 PLEKHM2Q8IWE5 1019 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 STK11IPQ8N1F8 1099 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 EXOC6Q8TAG9 804 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 DDX20Q9UHI6 824 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3B-208ENST00000570189 PFASO15067 1338 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 TRIOBPQ9H2D6 2365 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 A0A0D9SFI3 127 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 ORC4O43929 436 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 FDX1P10109 184 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 TFAP4Q01664 338 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 TRPV1Q8NER1 839 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 GMCL1Q96IK5 515 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 MAML3Q96JK9 1138 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 FEM1BQ9UK73 627 aa20.29■□□□□ 0.84
MAP1LC3B-208ENST00000570189 DNAH12Q6ZR08 3092 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 SMCHD1A6NHR9 2005 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 PLA2G6O60733 806 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 CYP2C19P33261 490 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 OAZ1P54368 228 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 FAM227BQ96M60 508 aa20.28■□□□□ 0.84
MAP1LC3B-208ENST00000570189 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms