RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ICA1Q05084 483 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 WWC2Q6AWC2 1192 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 TMEM179Q6ZVK1 233 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 SPZ1Q9BXG8 430 aa12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 FOXP1Q9H334 677 aaPredicted RBP12.61□□□□□ -0.39
PDXDC1-216ENST00000569715 NASPP49321 788 aaPredicted RBP12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 TOB1P50616 345 aaPredicted RBP12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 RASA3Q14644 834 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 KIF4BQ2VIQ3 1234 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 ANO1Q5XXA6 986 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 KANSL2Q9H9L4 492 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 SYCE3A1L190 88 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 XBP1P17861 261 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 TTBK2Q6IQ55 1244 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 RAD21O60216 631 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 KRT2P35908 639 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 ZNF543Q08ER8 600 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 STK38Q15208 465 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 SF3A1Q15459 793 aaKnown RBP12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 TRPM4Q8TD43 1214 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 NYAP2Q9P242 653 aa12.6□□□□□ -0.39
PDXDC1-216ENST00000569715 ME1P48163 572 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 PIGSQ96S52 555 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 LZTS2Q9BRK4 669 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 ATAD5Q96QE3 1844 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 GOLGA6L4A6NEF3 574 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 ASPRV1Q53RT3 343 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 BICD2Q8TD16 824 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 TNFRSF25Q93038 417 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 TEPSINQ96N21 525 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 SLC16A2P36021 539 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 GOLPH3LQ9H4A5 285 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 CABP5Q9NP86 173 aa12.59□□□□□ -0.39
PDXDC1-216ENST00000569715 A0A1W2PRG0 241 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 FSD2A1L4K1 749 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 STXBP3O00186 592 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 WNT7AO00755 349 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 YEATS4O95619 227 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 NLRP5P59047 1200 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 PTPAQ15257 358 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 MKL1Q969V6 931 aa12.58□□□□□ -0.39
PDXDC1-216ENST00000569715 SPTLC2O15270 562 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 MARCKSP29966 332 aaPredicted RBP12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 ZNF445P59923 1031 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 RIOX1Q9H6W3 641 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 GPRC5DQ9NZD1 345 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 NR1I2O75469 434 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 RASGRP4Q8TDF6 673 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 RNF181Q9P0P0 153 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 ZBTB21Q9ULJ3 1066 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 PCDHB6Q9Y5E3 794 aa12.58□□□□□ -0.4
PDXDC1-216ENST00000569715 EPS15P42566 896 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 ECE1P42892 770 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 CCDC183Q5T5S1 534 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 GPC2Q8N158 579 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 RRP36Q96EU6 259 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 BARHL2Q9NY43 387 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 ISY1Q9ULR0 285 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 TNNI2P48788 182 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 MMP14P50281 582 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 SLC39A14Q15043 492 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 SLFN13Q68D06 897 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 DACT1Q9NYF0 836 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 TBC1D12O60347 775 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 ADGRF4Q8IZF3 695 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 KCNG4Q8TDN1 519 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 JMJD4Q9H9V9 463 aa12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 POLR2AP24928 1970 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-216ENST00000569715 DDNO94850 711 aaPredicted RBP12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 SH3GLB2Q9NR46 395 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 GOLGA6L3A6NEY3 463 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 F5H6K3 240 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 H7C1D1 291 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 NDUFB10O96000 172 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 SMARCA1P28370 1054 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 SLC1A4P43007 532 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 KLRC3Q07444 240 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 TNFAIP1Q13829 316 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 KIAA1755Q5JYT7 1200 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 BRMS1Q9HCU9 246 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 SEC63Q9UGP8 760 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms