RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 KANSL2Q9H9L4 492 aa25.94■■□□□ 1.74
VCPKMT-205ENST00000569518 NYAP2Q9P242 653 aa25.94■■□□□ 1.74
VCPKMT-205ENST00000569518 AXDND1Q5T1B0 1012 aaPredicted RBP25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 FAM177A1Q8N128 213 aaPredicted RBP25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 CPVLQ9H3G5 476 aa25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 BRMS1Q9HCU9 246 aa25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 PPP6R2O75170 966 aa25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 NBPF9Q3BBW0 867 aa25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 WWC2Q6AWC2 1192 aa25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 GPKOWQ92917 476 aaPredicted RBP eCLIP25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 RIOX1Q9H6W3 641 aa25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.93■■□□□ 1.74
VCPKMT-205ENST00000569518 MYO1BO43795 1136 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 ZNF543Q08ER8 600 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 RRP1BQ14684 758 aaKnown RBP25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 ABCB5Q2M3G0 1257 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 EARS2Q5JPH6 523 aaKnown RBP25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 TYW1BQ6NUM6 668 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 SIAH1Q8IUQ4 282 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 ENGASEQ8NFI3 743 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 NUP62CLQ9H1M0 184 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 VEZTQ9HBM0 779 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 PGAP2Q9UHJ9 254 aa25.92■■□□□ 1.74
VCPKMT-205ENST00000569518 FAM205CA6NFA0 338 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 EEF2P13639 858 aaKnown RBP25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 CALML3P27482 149 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 NLRP5P59047 1200 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 JAG1P78504 1218 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 SEPT2Q15019 361 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 DPF2Q92785 391 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 CLSTN2Q9H4D0 955 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 CABP5Q9NP86 173 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 BARHL2Q9NY43 387 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 FRMPD2Q68DX3 1309 aaPredicted RBP25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 DICER1Q9UPY3 1922 aaKnown RBP25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 STXBP3O00186 592 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 GDF11O95390 407 aa25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 GMPSP49915 693 aaPredicted RBP25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 SNW1Q13573 536 aaKnown RBP25.91■■□□□ 1.74
VCPKMT-205ENST00000569518 FAM160A1Q05DH4 1040 aa25.9■■□□□ 1.74
VCPKMT-205ENST00000569518 RBM43Q6ZSC3 357 aaKnown RBP25.9■■□□□ 1.74
VCPKMT-205ENST00000569518 FSIP1Q8NA03 581 aa25.9■■□□□ 1.74
VCPKMT-205ENST00000569518 MRPS27Q92552 414 aaKnown RBP25.9■■□□□ 1.74
VCPKMT-205ENST00000569518 RRP36Q96EU6 259 aaKnown RBP25.9■■□□□ 1.74
VCPKMT-205ENST00000569518 TMEM39BQ9GZU3 492 aa25.9■■□□□ 1.74
VCPKMT-205ENST00000569518 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.9■■□□□ 1.74
VCPKMT-205ENST00000569518 ADAMTS3O15072 1205 aa25.89■■□□□ 1.74
VCPKMT-205ENST00000569518 EGFRP00533 1210 aa25.89■■□□□ 1.74
VCPKMT-205ENST00000569518 CCDC73Q6ZRK6 1079 aa25.89■■□□□ 1.74
VCPKMT-205ENST00000569518 JMYQ8N9B5 988 aa25.89■■□□□ 1.74
VCPKMT-205ENST00000569518 DAGLBQ8NCG7 672 aa25.89■■□□□ 1.74
VCPKMT-205ENST00000569518 MARCKSP29966 332 aaPredicted RBP25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 ATP2B2Q01814 1243 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 ICA1Q05084 483 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 HEATR3Q7Z4Q2 680 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 CDAN1Q8IWY9 1227 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 CCDC148Q8NFR7 591 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 FUCA2Q9BTY2 467 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 UBA5Q9GZZ9 404 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 RBSNQ9H1K0 784 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 TSPY26PQ9H489 355 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 PCDHB6Q9Y5E3 794 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 MORC2Q9Y6X9 1032 aaPredicted RBP25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 ZNF541Q9H0D2 1346 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 TBC1D12O60347 775 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 GH2P01242 217 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 NOM1Q5C9Z4 860 aaKnown RBP25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 GPATCH4Q5T3I0 446 aaKnown RBP25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 RBM26Q5T8P6 1007 aaKnown RBP25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 PCDHA4Q9UN74 947 aa25.88■■□□□ 1.73
VCPKMT-205ENST00000569518 M0R2N6 131 aa25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 CMA1P23946 247 aa25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 GALNT17Q6IS24 598 aa25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 MICALL2Q8IY33 904 aa25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 BLIDQ8IZY5 108 aa25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 FMR1NBQ8N0W7 255 aaPredicted RBP25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 PIGSQ96S52 555 aa25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 FHDC1Q9C0D6 1143 aaPredicted RBP25.87■■□□□ 1.73
VCPKMT-205ENST00000569518 TNMDQ9H2S6 317 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 GPCPD1Q9NPB8 672 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 SBF1O95248 1867 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 MAP3K10Q02779 954 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 CAMK4Q16566 473 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 MAP3K11Q16584 847 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 DCAF4Q8WV16 495 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 SEC63Q9UGP8 760 aaKnown RBP25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 GJA3Q9Y6H8 435 aa25.86■■□□□ 1.73
VCPKMT-205ENST00000569518 HOMER1Q86YM7 354 aa25.85■■□□□ 1.73
VCPKMT-205ENST00000569518 GMCL1P1Q8NEA9 526 aa25.85■■□□□ 1.73
VCPKMT-205ENST00000569518 ZMYND12Q9H0C1 365 aa25.85■■□□□ 1.73
VCPKMT-205ENST00000569518 SYNPO2Q9UMS6 1093 aa25.85■■□□□ 1.73
VCPKMT-205ENST00000569518 A0A1B0GVL5 298 aa25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 TRIM75PA6NK02 468 aa25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 hCG_1984214I3L0E3 225 aa25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 CUTAO60888 179 aa25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 NDUFA8P51970 172 aa25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 ZNF713Q8N859 430 aaPredicted RBP25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 VAT1LQ9HCJ6 419 aa25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 CNOT7Q9UIV1 285 aaKnown RBP25.84■■□□□ 1.73
VCPKMT-205ENST00000569518 NOL7Q9UMY1 257 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms