RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 SMARCA1P28370 1054 aa8.83□□□□□ -1
CDH13-214ENST00000569455 NF2P35240 595 aa8.83□□□□□ -1
CDH13-214ENST00000569455 GUCY1B3Q02153 619 aa8.83□□□□□ -1
CDH13-214ENST00000569455 FUT2Q10981 343 aa8.83□□□□□ -1
CDH13-214ENST00000569455 DGKZQ13574 1117 aa8.83□□□□□ -1
CDH13-214ENST00000569455 FOXD4L6Q3SYB3 417 aaPredicted RBP8.83□□□□□ -1
CDH13-214ENST00000569455 ASPRV1Q53RT3 343 aa8.83□□□□□ -1
CDH13-214ENST00000569455 MAP1SQ66K74 1059 aaPredicted RBP8.83□□□□□ -1
CDH13-214ENST00000569455 KRT40Q6A162 431 aa8.83□□□□□ -1
CDH13-214ENST00000569455 FOXD4L3Q6VB84 417 aaPredicted RBP8.83□□□□□ -1
CDH13-214ENST00000569455 CCDC82Q8N4S0 544 aa8.83□□□□□ -1
CDH13-214ENST00000569455 TMEM87AQ8NBN3 555 aa8.83□□□□□ -1
CDH13-214ENST00000569455 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.83□□□□□ -1
CDH13-214ENST00000569455 SCAND2PQ9GZW5 306 aaPredicted RBP8.83□□□□□ -1
CDH13-214ENST00000569455 DEFB129Q9H1M3 183 aa8.83□□□□□ -1
CDH13-214ENST00000569455 NYAP2Q9P242 653 aa8.83□□□□□ -1
CDH13-214ENST00000569455 CLIP2Q9UDT6 1046 aa8.83□□□□□ -1
CDH13-214ENST00000569455 TSKSQ9UJT2 592 aa8.83□□□□□ -1
CDH13-214ENST00000569455 SYNPO2Q9UMS6 1093 aa8.83□□□□□ -1
CDH13-214ENST00000569455 CASP8AP2Q9UKL3 1982 aa8.82□□□□□ -1
CDH13-214ENST00000569455 ATAD5Q96QE3 1844 aa8.82□□□□□ -1
CDH13-214ENST00000569455 BAZ2BQ9UIF8 2168 aaKnown RBP8.82□□□□□ -1
CDH13-214ENST00000569455 FAM196BA6NMK8 535 aa8.82□□□□□ -1
CDH13-214ENST00000569455 KLRF2D3W0D1 207 aa8.82□□□□□ -1
CDH13-214ENST00000569455 FIBPO43427 364 aa8.82□□□□□ -1
CDH13-214ENST00000569455 ATP2B2Q01814 1243 aa8.82□□□□□ -1
CDH13-214ENST00000569455 ICA1Q05084 483 aa8.82□□□□□ -1
CDH13-214ENST00000569455 DNM1Q05193 864 aaKnown RBP8.82□□□□□ -1
CDH13-214ENST00000569455 RASA3Q14644 834 aa8.82□□□□□ -1
CDH13-214ENST00000569455 GPATCH4Q5T3I0 446 aaKnown RBP8.82□□□□□ -1
CDH13-214ENST00000569455 FAM177A1Q8N128 213 aaPredicted RBP8.82□□□□□ -1
CDH13-214ENST00000569455 CMTR1Q8N1G2 835 aaKnown RBP8.82□□□□□ -1
CDH13-214ENST00000569455 SRBD1Q8N5C6 995 aaKnown RBP8.82□□□□□ -1
CDH13-214ENST00000569455 MKL1Q969V6 931 aa8.82□□□□□ -1
CDH13-214ENST00000569455 HHIPL1Q96JK4 782 aa8.82□□□□□ -1
CDH13-214ENST00000569455 CAPNS2Q96L46 248 aa8.82□□□□□ -1
CDH13-214ENST00000569455 AIFM3Q96NN9 605 aa8.82□□□□□ -1
CDH13-214ENST00000569455 SPZ1Q9BXG8 430 aa8.82□□□□□ -1
CDH13-214ENST00000569455 TMEM39BQ9GZU3 492 aa8.82□□□□□ -1
CDH13-214ENST00000569455 ARHGEF10LQ9HCE6 1279 aa8.82□□□□□ -1
CDH13-214ENST00000569455 BRMS1Q9HCU9 246 aa8.82□□□□□ -1
CDH13-214ENST00000569455 LMBRD1Q9NUN5 540 aa8.82□□□□□ -1
CDH13-214ENST00000569455 MAD2L2Q9UI95 211 aa8.82□□□□□ -1
CDH13-214ENST00000569455 MTMR7Q9Y216 660 aa8.82□□□□□ -1
CDH13-214ENST00000569455 CNPY2Q9Y2B0 182 aa8.82□□□□□ -1
CDH13-214ENST00000569455 DDX49Q9Y6V7 483 aaKnown RBP8.82□□□□□ -1
CDH13-214ENST00000569455 V9GY48 417 aaPredicted RBP8.82□□□□□ -1
CDH13-214ENST00000569455 GDF11O95390 407 aa8.81□□□□□ -1
CDH13-214ENST00000569455 MMP1P03956 469 aa8.81□□□□□ -1
CDH13-214ENST00000569455 PDHBP11177 359 aa8.81□□□□□ -1
CDH13-214ENST00000569455 SCG2P13521 617 aa8.81□□□□□ -1
CDH13-214ENST00000569455 EEF2P13639 858 aaKnown RBP8.81□□□□□ -1
CDH13-214ENST00000569455 SOX10P56693 466 aa8.81□□□□□ -1
CDH13-214ENST00000569455 KIF23Q02241 960 aaPredicted RBP8.81□□□□□ -1
CDH13-214ENST00000569455 SEPT2Q15019 361 aa8.81□□□□□ -1
CDH13-214ENST00000569455 PFKFB3Q16875 520 aaPredicted RBP8.81□□□□□ -1
CDH13-214ENST00000569455 KLHL40Q2TBA0 621 aa8.81□□□□□ -1
CDH13-214ENST00000569455 DCAF15Q66K64 600 aa8.81□□□□□ -1
CDH13-214ENST00000569455 OTUD7BQ6GQQ9 843 aa8.81□□□□□ -1
CDH13-214ENST00000569455 PAXIP1Q6ZW49 1069 aaPredicted RBP8.81□□□□□ -1
CDH13-214ENST00000569455 USP48Q86UV5 1035 aa8.81□□□□□ -1
CDH13-214ENST00000569455 LRRC47Q8N1G4 583 aaKnown RBP8.81□□□□□ -1
CDH13-214ENST00000569455 CCDC148Q8NFR7 591 aa8.81□□□□□ -1
CDH13-214ENST00000569455 DCAF4Q8WV16 495 aa8.81□□□□□ -1
CDH13-214ENST00000569455 RRP36Q96EU6 259 aaKnown RBP8.81□□□□□ -1
CDH13-214ENST00000569455 SPATA32Q96LK8 384 aa8.81□□□□□ -1
CDH13-214ENST00000569455 SH3GLB2Q9NR46 395 aa8.81□□□□□ -1
CDH13-214ENST00000569455 GINM1Q9NU53 330 aa8.81□□□□□ -1
CDH13-214ENST00000569455 SEC63Q9UGP8 760 aaKnown RBP8.81□□□□□ -1
CDH13-214ENST00000569455 ELP1O95163 1332 aa8.8□□□□□ -1
CDH13-214ENST00000569455 GOLGA6L4A6NEF3 574 aa8.8□□□□□ -1
CDH13-214ENST00000569455 USP17L5A8MUK1 530 aa8.8□□□□□ -1
CDH13-214ENST00000569455 hCG_1984214I3L0E3 225 aa8.8□□□□□ -1
CDH13-214ENST00000569455 PPP1R12BO60237 982 aaPredicted RBP8.8□□□□□ -1
CDH13-214ENST00000569455 GH2P01242 217 aa8.8□□□□□ -1
CDH13-214ENST00000569455 SNHG28P0DPA3 235 aa8.8□□□□□ -1
CDH13-214ENST00000569455 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -1
CDH13-214ENST00000569455 CALML3P27482 149 aa8.8□□□□□ -1
CDH13-214ENST00000569455 GUCY1A2P33402 732 aa8.8□□□□□ -1
CDH13-214ENST00000569455 MAP2K2P36507 400 aa8.8□□□□□ -1
CDH13-214ENST00000569455 MAP3K10Q02779 954 aa8.8□□□□□ -1
CDH13-214ENST00000569455 GRM1Q13255 1194 aa8.8□□□□□ -1
CDH13-214ENST00000569455 PKN1Q16512 942 aa8.8□□□□□ -1
CDH13-214ENST00000569455 MAP3K11Q16584 847 aa8.8□□□□□ -1
CDH13-214ENST00000569455 CCDC96Q2M329 555 aa8.8□□□□□ -1
CDH13-214ENST00000569455 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
CDH13-214ENST00000569455 CLEC10AQ8IUN9 316 aa8.8□□□□□ -1
CDH13-214ENST00000569455 STAG2Q8N3U4 1231 aa8.8□□□□□ -1
CDH13-214ENST00000569455 ZNF713Q8N859 430 aaPredicted RBP8.8□□□□□ -1
CDH13-214ENST00000569455 C2orf69Q8N8R5 385 aa8.8□□□□□ -1
CDH13-214ENST00000569455 GMCL1P1Q8NEA9 526 aa8.8□□□□□ -1
CDH13-214ENST00000569455 CCDC12Q8WUD4 166 aaPredicted RBP8.8□□□□□ -1
CDH13-214ENST00000569455 CDCA5Q96FF9 252 aa8.8□□□□□ -1
CDH13-214ENST00000569455 CHAMP1Q96JM3 812 aa8.8□□□□□ -1
CDH13-214ENST00000569455 GLIS2Q9BZE0 524 aaPredicted RBP8.8□□□□□ -1
CDH13-214ENST00000569455 FOXP1Q9H334 677 aaPredicted RBP8.8□□□□□ -1
CDH13-214ENST00000569455 SH2D4AQ9H788 454 aa8.8□□□□□ -1
CDH13-214ENST00000569455 ZBTB21Q9ULJ3 1066 aa8.8□□□□□ -1
CDH13-214ENST00000569455 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
CDH13-214ENST00000569455 DOCK1Q14185 1865 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms