RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 TMX4Q9H1E5 349 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 TTC12Q9H892 705 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 MKNK2Q9HBH9 465 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 MKRN1Q9UHC7 482 aaKnown RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 FBXO2Q9UK22 296 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 TACC3Q9Y6A5 838 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 CACNA1GO43497 2377 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 DDX60LQ5H9U9 1706 aaKnown RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 PLIN4Q96Q06 1357 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 RGPD3A6NKT7 1758 aaPredicted RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 RGPD4Q7Z3J3 1758 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 GAKO14976 1311 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 LTBP1Q14766 1721 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 QSER1Q2KHR3 1735 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 NRXN2Q9P2S2 1712 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 GPR75-ASB3A0A0A6YYF3 556 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 KIF2AO00139 706 aaPredicted RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 LAD1O00515 517 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 DYNC1I1O14576 645 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 KIF3CO14782 793 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 AP5Z1O43299 807 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 CCP110O43303 1012 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 TUBB4AP04350 444 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 MARCKSP29966 332 aaPredicted RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 GUCY1A2P33402 732 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 TXLNAP40222 546 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 MKRN3Q13064 507 aaKnown RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 GRM4Q14833 912 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 POSTNQ15063 836 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 PKN1Q16512 942 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 DPCR1Q3MIW9 517 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 ARL6IP4Q66PJ3 421 aaKnown RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 SP8Q8IXZ3 490 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 ZNF444Q8N0Y2 327 aaPredicted RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 MLKLQ8NB16 471 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 DAGLBQ8NCG7 672 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 PNMA1Q8ND90 353 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 CCDC112Q8NEF3 446 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 NKX2-3Q8TAU0 364 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 RTFDC1Q9BY42 306 aaPredicted RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 GTPBP4Q9BZE4 634 aaKnown RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 COA1Q9GZY4 146 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 OSBPL5Q9H0X9 879 aaPredicted RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 CD209Q9NNX6 404 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 INCENPQ9NQS7 918 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 GJB4Q9NTQ9 266 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 KCNJ14Q9UNX9 436 aa6.54□□□□□ -1.36
CDH13-213ENST00000569454 BAZ2AQ9UIF9 1905 aaKnown RBP6.54□□□□□ -1.36
CDH13-213ENST00000569454 TAF1P21675 1872 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 MYH6P13533 1939 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 CYP2D7A0A087X1C5 515 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 POLRMTO00411 1230 aaKnown RBP6.53□□□□□ -1.36
CDH13-213ENST00000569454 PPEF1O14829 653 aaPredicted RBP6.53□□□□□ -1.36
CDH13-213ENST00000569454 PLSCR1O15162 318 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 PRDM1O75626 825 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 MYL1P05976 194 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 TSPY3P0CV98 308 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 TSPY8P0CW00 308 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 NPR1P16066 1061 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 PTGS1P23219 599 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 ERCC5P28715 1186 aaPredicted RBP6.53□□□□□ -1.36
CDH13-213ENST00000569454 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 PDE6BP35913 854 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 PLA2G5P39877 138 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 BTDP43251 543 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 TOB1P50616 345 aaPredicted RBP6.53□□□□□ -1.36
CDH13-213ENST00000569454 NLRP5P59047 1200 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 GPSM2P81274 684 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 ATP2C1P98194 919 aaPredicted RBP6.53□□□□□ -1.36
CDH13-213ENST00000569454 TFAP4Q01664 338 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 TTC38Q5R3I4 469 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 MFSD14BQ5SR56 506 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 C16orf86Q6ZW13 317 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 CCDC186Q7Z3E2 898 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 TXNRD3Q86VQ6 643 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 TEX11Q8IYF3 940 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 STK11IPQ8N1F8 1099 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 SPC24Q8NBT2 197 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 TNFRSF25Q93038 417 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 SMARCE1Q969G3 411 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 MAP7D2Q96T17 732 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 EYA3Q99504 573 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 SPZ1Q9BXG8 430 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 FHDC1Q9C0D6 1143 aaPredicted RBP6.53□□□□□ -1.36
CDH13-213ENST00000569454 MAGEF1Q9HAY2 307 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 CABP5Q9NP86 173 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 KCND1Q9NSA2 647 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 LRRC4BQ9NT99 713 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 VPS54Q9P1Q0 977 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 SWAP70Q9UH65 585 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 ATP6V0A2Q9Y487 856 aa6.53□□□□□ -1.36
CDH13-213ENST00000569454 V9GY48 417 aaPredicted RBP6.53□□□□□ -1.36
CDH13-213ENST00000569454 FLT1P17948 1338 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 SNED1Q8TER0 1413 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 ESYT2A0FGR8 921 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 PLEKHA8P1O95397 391 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 SLFN14P0C7P3 912 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 TOP1P11387 765 aaKnown RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 HOXB3P14651 431 aaPredicted RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 SFPQP23246 707 aaKnown RBP eCLIP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms