RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 MFSD14CQ5VZR4 134 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
TSC2-220ENST00000568238 STK11IPQ8N1F8 1099 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 SHCBP1Q8NEM2 672 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 ATG4CQ96DT6 458 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
TSC2-220ENST00000568238 NACAP1Q9BZK3 213 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 ZNF287Q9HBT7 754 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 STAP2Q9UGK3 403 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 OGDHLQ9ULD0 1010 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
TSC2-220ENST00000568238 RAD21O60216 631 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 EVI5O60447 810 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 ERCC3P19447 782 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 CCND3P30281 292 aaPredicted RBP15.36■□□□□ 0.05
TSC2-220ENST00000568238 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 SKAP1Q86WV1 359 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 PLEKHM2Q8IWE5 1019 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 FLRT1Q9NZU1 646 aa15.36■□□□□ 0.05
TSC2-220ENST00000568238 PATL2C9JE40 543 aaKnown RBP15.35■□□□□ 0.05
TSC2-220ENST00000568238 STRNO43815 780 aa15.35■□□□□ 0.05
TSC2-220ENST00000568238 ADORA2AP29274 412 aa15.35■□□□□ 0.05
TSC2-220ENST00000568238 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
TSC2-220ENST00000568238 IFNL3Q8IZI9 196 aa15.35■□□□□ 0.05
TSC2-220ENST00000568238 SEC62Q99442 399 aaKnown RBP15.35■□□□□ 0.05
TSC2-220ENST00000568238 MROH8Q9H579 483 aa15.35■□□□□ 0.05
TSC2-220ENST00000568238 PRDM1O75626 825 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
TSC2-220ENST00000568238 TMEM132BQ14DG7 1078 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 FAM83BQ5T0W9 1011 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 DPP9Q86TI2 863 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 NCAPG2Q86XI2 1143 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 NAPBQ9H115 298 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 C11orf49Q9H6J7 331 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 FBXO28Q9NVF7 368 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 NYAP2Q9P242 653 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 PLIN4Q96Q06 1357 aa15.34■□□□□ 0.05
TSC2-220ENST00000568238 SLC25A27O95847 323 aa15.33■□□□□ 0.04
TSC2-220ENST00000568238 SLC3A2P08195 630 aaKnown RBP15.33■□□□□ 0.04
TSC2-220ENST00000568238 PDE4BQ07343 736 aa15.33■□□□□ 0.04
TSC2-220ENST00000568238 OLFML2BQ68BL8 750 aa15.33■□□□□ 0.04
TSC2-220ENST00000568238 LHX8Q68G74 356 aa15.33■□□□□ 0.04
TSC2-220ENST00000568238 ZNF444Q8N0Y2 327 aaPredicted RBP15.33■□□□□ 0.04
TSC2-220ENST00000568238 ABRAQ8N0Z2 381 aa15.33■□□□□ 0.04
TSC2-220ENST00000568238 SLC5A4Q9NY91 659 aa15.33■□□□□ 0.04
TSC2-220ENST00000568238 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 VWA5AO00534 786 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 MSCO60682 206 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 NDUFB10O96000 172 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 CYP2C19P33261 490 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 FXR1P51114 621 aaKnown RBP eCLIP15.32■□□□□ 0.04
TSC2-220ENST00000568238 C7orf61Q8IZ16 206 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 EVI5LQ96CN4 794 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
TSC2-220ENST00000568238 ADAMTS5Q9UNA0 930 aa15.32■□□□□ 0.04
TSC2-220ENST00000568238 LAMA2P24043 3122 aaKnown RBP15.32■□□□□ 0.04
TSC2-220ENST00000568238 F5H6K3 240 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 FCER1AP12319 257 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 CNGA1P29973 690 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 COPB2P35606 906 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 KLRC3Q07444 240 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 PPARAQ07869 468 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 CCDC129Q6ZRS4 1044 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 SLF1Q9BQI6 1058 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 OSBPL3Q9H4L5 887 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 RBM27Q9P2N5 1060 aaKnown RBP15.31■□□□□ 0.04
TSC2-220ENST00000568238 CLIP2Q9UDT6 1046 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 DDX20Q9UHI6 824 aaKnown RBP15.31■□□□□ 0.04
TSC2-220ENST00000568238 PFASO15067 1338 aa15.31■□□□□ 0.04
TSC2-220ENST00000568238 TRIM6-TRIM34B2RNG4 842 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 COBLO75128 1261 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 TTLL1O95922 423 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 IGHA2P01877 340 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 CYBAP13498 195 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 LRRC47Q8N1G4 583 aaKnown RBP15.3■□□□□ 0.04
TSC2-220ENST00000568238 TRPV1Q8NER1 839 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 REPS2Q8NFH8 660 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 MMP19Q99542 508 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 ZNF214Q9UL59 606 aaPredicted RBP15.3■□□□□ 0.04
TSC2-220ENST00000568238 SYNPO2Q9UMS6 1093 aa15.3■□□□□ 0.04
TSC2-220ENST00000568238 FOXP2O15409 715 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 COL6A1P12109 1028 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 STAT3P40763 770 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 TTC22Q5TAA0 569 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 NEDD1Q8NHV4 660 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 MKL1Q969V6 931 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 RILPL2Q969X0 211 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 MAML3Q96JK9 1138 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 TEX13BQ9BXU2 312 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
TSC2-220ENST00000568238 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
TSC2-220ENST00000568238 KCTD2Q14681 263 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms