RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 ATP11BQ9Y2G3 1177 aa27.63■■■□□ 2.01
CNEP1R1-209ENST00000567712 POTEB2H3BUK9 544 aa27.62■■■□□ 2.01
CNEP1R1-209ENST00000567712 WDR46O15213 610 aaKnown RBP27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 FAM47AQ5JRC9 791 aa27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 CTR9Q6PD62 1173 aa27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 ABRAQ8N0Z2 381 aa27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 ARRDC4Q8NCT1 418 aa27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 CCDC17Q96LX7 622 aa27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 LBHD1Q9BQE6 289 aaPredicted RBP27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 SLC4A4Q9Y6R1 1079 aa27.61■■■□□ 2.01
CNEP1R1-209ENST00000567712 SMARCA5O60264 1052 aaPredicted RBP27.6■■■□□ 2.01
CNEP1R1-209ENST00000567712 MYCNP04198 464 aaPredicted RBP27.6■■■□□ 2.01
CNEP1R1-209ENST00000567712 PGK2P07205 417 aa27.6■■■□□ 2.01
CNEP1R1-209ENST00000567712 MS4A1P11836 297 aa27.6■■■□□ 2.01
CNEP1R1-209ENST00000567712 UBE3CQ15386 1083 aa27.6■■■□□ 2.01
CNEP1R1-209ENST00000567712 FERMT2Q96AC1 680 aa27.6■■■□□ 2.01
CNEP1R1-209ENST00000567712 GUCD1Q96NT3 240 aa27.6■■■□□ 2.01
CNEP1R1-209ENST00000567712 EYSQ5T1H1 3165 aa27.59■■■□□ 2.01
CNEP1R1-209ENST00000567712 ADCYAP1R1P41586 468 aa27.59■■■□□ 2.01
CNEP1R1-209ENST00000567712 SNX17Q15036 470 aa27.59■■■□□ 2.01
CNEP1R1-209ENST00000567712 LRRC41Q15345 812 aa27.59■■■□□ 2.01
CNEP1R1-209ENST00000567712 TRIM60Q495X7 471 aa27.59■■■□□ 2.01
CNEP1R1-209ENST00000567712 SH3RF1Q7Z6J0 888 aa27.59■■■□□ 2.01
CNEP1R1-209ENST00000567712 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.59■■■□□ 2.01
CNEP1R1-209ENST00000567712 FCER1AP12319 257 aa27.58■■■□□ 2.01
CNEP1R1-209ENST00000567712 TAL1P17542 331 aaPredicted RBP27.58■■■□□ 2.01
CNEP1R1-209ENST00000567712 C9orf50Q5SZB4 431 aa27.58■■■□□ 2.01
CNEP1R1-209ENST00000567712 REPS2Q8NFH8 660 aa27.58■■■□□ 2.01
CNEP1R1-209ENST00000567712 FAM161BQ96MY7 647 aa27.58■■■□□ 2.01
CNEP1R1-209ENST00000567712 SH2D4AQ9H788 454 aa27.58■■■□□ 2.01
CNEP1R1-209ENST00000567712 KBTBD13C9JR72 458 aa27.57■■■□□ 2
CNEP1R1-209ENST00000567712 SHHQ15465 462 aa27.57■■■□□ 2
CNEP1R1-209ENST00000567712 C20orf194Q5TEA3 1177 aa27.57■■■□□ 2
CNEP1R1-209ENST00000567712 DIEXFQ68CQ4 756 aaKnown RBP27.57■■■□□ 2
CNEP1R1-209ENST00000567712 RIOX2Q8IUF8 465 aa27.57■■■□□ 2
CNEP1R1-209ENST00000567712 VWA5AO00534 786 aa27.56■■■□□ 2
CNEP1R1-209ENST00000567712 FAM83BQ5T0W9 1011 aa27.56■■■□□ 2
CNEP1R1-209ENST00000567712 MMP19Q99542 508 aa27.56■■■□□ 2
CNEP1R1-209ENST00000567712 KANSL2Q9H9L4 492 aa27.56■■■□□ 2
CNEP1R1-209ENST00000567712 PRDM5Q9NQX1 630 aaPredicted RBP27.56■■■□□ 2
CNEP1R1-209ENST00000567712 PDLIM7Q9NR12 457 aa27.56■■■□□ 2
CNEP1R1-209ENST00000567712 SLC5A4Q9NY91 659 aa27.56■■■□□ 2
CNEP1R1-209ENST00000567712 ZNF214Q9UL59 606 aaPredicted RBP27.56■■■□□ 2
CNEP1R1-209ENST00000567712 PPP1R9AQ9ULJ8 1098 aa27.56■■■□□ 2
CNEP1R1-209ENST00000567712 MYH4Q9Y623 1939 aa27.55■■■□□ 2
CNEP1R1-209ENST00000567712 TRIM43BA6NCK2 446 aa27.55■■■□□ 2
CNEP1R1-209ENST00000567712 SLC25A27O95847 323 aa27.55■■■□□ 2
CNEP1R1-209ENST00000567712 ZNF792Q3KQV3 632 aa27.55■■■□□ 2
CNEP1R1-209ENST00000567712 FAM109BQ6ICB4 259 aaPredicted RBP27.55■■■□□ 2
CNEP1R1-209ENST00000567712 STK11IPQ8N1F8 1099 aa27.55■■■□□ 2
CNEP1R1-209ENST00000567712 BADQ92934 168 aa27.55■■■□□ 2
CNEP1R1-209ENST00000567712 TRIM43Q96BQ3 446 aaPredicted RBP27.55■■■□□ 2
CNEP1R1-209ENST00000567712 LENG1Q96BZ8 264 aaPredicted RBP27.55■■■□□ 2
CNEP1R1-209ENST00000567712 NUP88Q99567 741 aaPredicted RBP27.55■■■□□ 2
CNEP1R1-209ENST00000567712 PRKAG2Q9UGJ0 569 aa27.55■■■□□ 2
CNEP1R1-209ENST00000567712 MCM3APO60318 1980 aa27.54■■■□□ 2
CNEP1R1-209ENST00000567712 ITGB8P26012 769 aa27.54■■■□□ 2
CNEP1R1-209ENST00000567712 STAT3P40763 770 aa27.54■■■□□ 2
CNEP1R1-209ENST00000567712 CDH23Q9H251 3354 aa27.54■■■□□ 2
CNEP1R1-209ENST00000567712 STRBPQ96SI9 672 aaKnown RBP27.53■■■□□ 2
CNEP1R1-209ENST00000567712 TINF2Q9BSI4 451 aa27.53■■■□□ 2
CNEP1R1-209ENST00000567712 GSG1L2A8MUP6 293 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 RAD21O60216 631 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 PGK1P00558 417 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 ZNF865P0CJ78 1059 aaPredicted RBP27.52■■■□□ 2
CNEP1R1-209ENST00000567712 RASA1P20936 1047 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 AMOTL1Q8IY63 956 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 LRRCC1Q9C099 1032 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 GOPCQ9HD26 462 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 PHF24Q9UPV7 400 aa27.52■■■□□ 2
CNEP1R1-209ENST00000567712 TLE2Q04725 743 aa27.51■■□□□ 1.99
CNEP1R1-209ENST00000567712 XPNPEP3Q9NQH7 507 aa27.51■■□□□ 1.99
CNEP1R1-209ENST00000567712 RIPK3Q9Y572 518 aa27.51■■□□□ 1.99
CNEP1R1-209ENST00000567712 C1orf53Q5VUE5 145 aa27.5■■□□□ 1.99
CNEP1R1-209ENST00000567712 TSHZ3Q63HK5 1081 aa27.5■■□□□ 1.99
CNEP1R1-209ENST00000567712 OSBP2Q969R2 916 aa27.5■■□□□ 1.99
CNEP1R1-209ENST00000567712 DDRGK1Q96HY6 314 aa27.5■■□□□ 1.99
CNEP1R1-209ENST00000567712 ARPP21Q9UBL0 812 aaPredicted RBP27.5■■□□□ 1.99
CNEP1R1-209ENST00000567712 PRUNE2Q8WUY3 3088 aa27.5■■□□□ 1.99
CNEP1R1-209ENST00000567712 KCTD2Q14681 263 aa27.49■■□□□ 1.99
CNEP1R1-209ENST00000567712 SBK1Q52WX2 424 aa27.49■■□□□ 1.99
CNEP1R1-209ENST00000567712 NRBP1Q9UHY1 535 aa27.49■■□□□ 1.99
CNEP1R1-209ENST00000567712 RCAN3Q9UKA8 241 aa27.49■■□□□ 1.99
CNEP1R1-209ENST00000567712 DIS3Q9Y2L1 958 aaKnown RBP27.49■■□□□ 1.99
CNEP1R1-209ENST00000567712 RARBP10826 455 aa27.48■■□□□ 1.99
CNEP1R1-209ENST00000567712 ZSCAN25Q6NSZ9 544 aa27.48■■□□□ 1.99
CNEP1R1-209ENST00000567712 EPB41L4AQ9HCS5 686 aaPredicted RBP27.48■■□□□ 1.99
CNEP1R1-209ENST00000567712 EPHB4P54760 987 aa27.47■■□□□ 1.99
CNEP1R1-209ENST00000567712 SLF1Q9BQI6 1058 aa27.47■■□□□ 1.99
CNEP1R1-209ENST00000567712 ECHDC1Q9NTX5 307 aa27.47■■□□□ 1.99
CNEP1R1-209ENST00000567712 ROBO3Q96MS0 1386 aa27.47■■□□□ 1.99
CNEP1R1-209ENST00000567712 VCANP13611 3396 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 IGKV6D-41A0A0C4DH26 115 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 A0A1W2PQ45 241 aaPredicted RBP27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 A0A1W2PQY0 241 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 MINDY4BA8MYZ0 360 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 F5H6K3 240 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 ADAMTS4O75173 837 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 SNAI1O95863 264 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms