RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 EFCC1Q9HA90 598 aa17.79■□□□□ 0.44
COMMD4-219ENST00000567399 TRIM17Q9Y577 477 aa17.79■□□□□ 0.44
COMMD4-219ENST00000567399 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 HOXD10P28358 340 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 DSG3P32926 999 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 MCM5P33992 734 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 PSMC4P43686 418 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 FCGRTP55899 365 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 CCNA1P78396 465 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 PLS1Q14651 629 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 WTAPQ15007 396 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 TMEM67Q5HYA8 995 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 RCSD1Q6JBY9 416 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 KCTD1Q719H9 257 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 CTU1Q7Z7A3 348 aaKnown RBP17.78■□□□□ 0.44
COMMD4-219ENST00000567399 CHURC1Q8WUH1 139 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 DCAF4Q8WV16 495 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 KIFC2Q96AC6 838 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 NEK1Q96PY6 1258 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 SLF1Q9BQI6 1058 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 FEM1BQ9UK73 627 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
COMMD4-219ENST00000567399 SPDYE16A6NNV3 312 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-219ENST00000567399 NOVP48745 357 aa17.77■□□□□ 0.44
COMMD4-219ENST00000567399 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-219ENST00000567399 WDR78Q5VTH9 848 aa17.77■□□□□ 0.44
COMMD4-219ENST00000567399 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-219ENST00000567399 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
COMMD4-219ENST00000567399 PNMA1Q8ND90 353 aa17.77■□□□□ 0.44
COMMD4-219ENST00000567399 FBXO28Q9NVF7 368 aa17.77■□□□□ 0.44
COMMD4-219ENST00000567399 RBPJLQ9UBG7 517 aa17.77■□□□□ 0.44
COMMD4-219ENST00000567399 MYH4Q9Y623 1939 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 MYPNQ86TC9 1320 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 TNPO2O14787 897 aaKnown RBP17.76■□□□□ 0.43
COMMD4-219ENST00000567399 EPB41L2O43491 1005 aaKnown RBP17.76■□□□□ 0.43
COMMD4-219ENST00000567399 PRC1O43663 620 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 ZBED4O75132 1171 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 HSPA4P34932 840 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 STAT2P52630 851 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 ERVK-9P63128 1117 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 ERVK-24P63145 666 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 NFXL1Q6ZNB6 911 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 FAM160B2Q86V87 743 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 MB21D2Q8IYB1 491 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-219ENST00000567399 MB21D1Q8N884 522 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 ANKS1AQ92625 1134 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 COA7Q96BR5 231 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 ATG4CQ96DT6 458 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 TXNRD2Q9NNW7 524 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 GPCPD1Q9NPB8 672 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 PPP1R9AQ9ULJ8 1098 aa17.76■□□□□ 0.43
COMMD4-219ENST00000567399 FRMPD2Q68DX3 1309 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-219ENST00000567399 PEX10O60683 326 aa17.75■□□□□ 0.43
COMMD4-219ENST00000567399 HMGB1P09429 215 aaKnown RBP17.75■□□□□ 0.43
COMMD4-219ENST00000567399 SLC4A3P48751 1232 aa17.75■□□□□ 0.43
COMMD4-219ENST00000567399 FGD1P98174 961 aa17.75■□□□□ 0.43
COMMD4-219ENST00000567399 LBX2Q6XYB7 198 aa17.75■□□□□ 0.43
COMMD4-219ENST00000567399 RASEFQ8IZ41 740 aa17.75■□□□□ 0.43
COMMD4-219ENST00000567399 USP26Q9BXU7 913 aa17.75■□□□□ 0.43
COMMD4-219ENST00000567399 ARHGAP39Q9C0H5 1083 aa17.75■□□□□ 0.43
COMMD4-219ENST00000567399 CASP8AP2Q9UKL3 1982 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 CCDC69A6NI79 296 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 GNRH1P01148 92 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 PSMA5P28066 241 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 PKN2Q16513 984 aaKnown RBP17.74■□□□□ 0.43
COMMD4-219ENST00000567399 Q3C1V9 767 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 TSGA10IPQ3SY00 556 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 OTOP1Q7RTM1 612 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 CATIPQ7Z7H3 387 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 TNS4Q8IZW8 715 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 TMTC2Q8N394 836 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 TMEM87BQ96K49 555 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 JAKMIP1Q96N16 626 aaKnown RBP17.74■□□□□ 0.43
COMMD4-219ENST00000567399 BTBD7Q9P203 1132 aa17.74■□□□□ 0.43
COMMD4-219ENST00000567399 VWA5AO00534 786 aa17.73■□□□□ 0.43
COMMD4-219ENST00000567399 PARP1P09874 1014 aaKnown RBP17.73■□□□□ 0.43
COMMD4-219ENST00000567399 PDHBP11177 359 aa17.73■□□□□ 0.43
COMMD4-219ENST00000567399 MAPK4P31152 587 aa17.73■□□□□ 0.43
COMMD4-219ENST00000567399 SEC23AQ15436 765 aa17.73■□□□□ 0.43
COMMD4-219ENST00000567399 DHX32Q7L7V1 743 aaKnown RBP17.73■□□□□ 0.43
COMMD4-219ENST00000567399 CPXCR1Q8N123 301 aa17.73■□□□□ 0.43
COMMD4-219ENST00000567399 TRIM47Q96LD4 638 aa17.73■□□□□ 0.43
COMMD4-219ENST00000567399 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
COMMD4-219ENST00000567399 DHX16O60231 1041 aaKnown RBP17.72■□□□□ 0.43
COMMD4-219ENST00000567399 CNMDO75829 334 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 FDX1P10109 184 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 ANTXR2P58335 489 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 ADCK5Q3MIX3 580 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 GPATCH4Q5T3I0 446 aaKnown RBP17.72■□□□□ 0.43
COMMD4-219ENST00000567399 TTBK2Q6IQ55 1244 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 RASGRP2Q7LDG7 609 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 NCAPG2Q86XI2 1143 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 MTA3Q9BTC8 594 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
COMMD4-219ENST00000567399 MCOLN1Q9GZU1 580 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms