RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 N4BP1O75113 896 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PHACTR2O75167 634 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GADD45BO75293 160 aaPredicted RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GSPT1P15170 499 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 EEF1GP26641 437 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 RNASELQ05823 741 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SEPT6Q14141 434 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 NEDD9Q14511 834 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SLMAPQ14BN4 828 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF365Q70YC5 407 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 UPF1Q92900 1129 aaKnown RBP eCLIP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SEC62Q99442 399 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 EFCC1Q9HA90 598 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 METTL14Q9HCE5 456 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 VAT1LQ9HCJ6 419 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SAMM50Q9Y512 469 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ZMYM6O95789 1325 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 KIAA1210Q9ULL0 1709 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 LOC102724428A0A0B4J2F2 783 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PABPN1LA6NDY0 278 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 C6orf229H3BNL8 230 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MAP2K2P36507 400 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SMTNP53814 917 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SIK1P57059 783 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 RAPGEF1Q13905 1077 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MAP7Q14244 749 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ME3Q16798 604 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 CWF19L2Q2TBE0 894 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 NOSTRINQ8IVI9 506 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 AFAP1L2Q8N4X5 818 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GRK7Q8WTQ7 553 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SCLT1Q96NL6 688 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 COPRSQ9NQ92 184 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ATG3Q9NT62 314 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 TYW1Q9NV66 732 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 RCOR1Q9UKL0 485 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MRVI1Q9Y6F6 885 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SH3TC1Q8TE82 1336 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 LTBP4Q8N2S1 1624 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 RFX7Q2KHR2 1363 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ROBO1Q9Y6N7 1651 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC169A6NNP5 214 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 E7EWF7 191 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SEMA3EO15041 775 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PLSCR1O15162 318 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MBD4O95243 580 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 LDHBP07195 334 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 VIMP08670 466 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PFKFB1P16118 471 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 HSPA6P17066 643 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 LONP1P36776 959 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 TRPC3Q13507 836 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SLC15A2Q16348 729 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MAP7D1Q3KQU3 841 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 WDR44Q5JSH3 913 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GKAP1Q5VSY0 366 aaPredicted RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC62Q6P9F0 684 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GPT2Q8TD30 523 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 HAUS7Q99871 368 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ZKSCAN3Q9BRR0 538 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 IFIH1Q9BYX4 1025 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 VPS16Q9H269 839 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SLC52A2Q9HAB3 445 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SPTLC3Q9NUV7 552 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MCM9Q9NXL9 1143 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PIM2Q9P1W9 311 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 LARSQ9P2J5 1176 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PALLDQ8WX93 1383 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ANXA1P04083 346 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PHKG2P15735 406 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 AKNAD1Q5T1N1 836 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 C10orf76Q5T2E6 689 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 PHLDB3Q6NSJ2 640 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 FBXO18Q8NFZ0 1043 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 TSC1Q92574 1164 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 FAM81BQ96LP2 452 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 MYCBPQ99417 103 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 FOXP1Q9H334 677 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 KCNK9Q9NPC2 374 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ARPP21Q9UBL0 812 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF215Q9UL58 517 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 SSX2IPQ9Y2D8 614 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 FAN1Q9Y2M0 1017 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 A0A087WUV0 522 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 TLDC2A0PJX2 215 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 hCG_1984214I3L0E3 225 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 SPOPO43791 374 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 CIAO1O76071 339 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 DDAH1O94760 285 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 EIF4A1P60842 406 aaKnown RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 KLHL30Q0D2K2 578 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 TTLL12Q14166 644 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NAA25Q14CX7 972 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 SLC39A14Q15043 492 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 SND1Q7KZF4 910 aaKnown RBP eCLIP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NIM1KQ8IY84 436 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF713Q8N859 430 aaPredicted RBP4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 NELFBQ8WX92 580 aa4.81□□□□□ -1.64
LPCAT2-208ENST00000566915 XAGE2Q96GT9 111 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms