RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 ERCC3P19447 782 aa22.32■■□□□ 1.16
IFT140-208ENST00000566818 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
IFT140-208ENST00000566818 PPP1R9AQ9ULJ8 1098 aa22.32■■□□□ 1.16
IFT140-208ENST00000566818 SYNPO2Q9UMS6 1093 aa22.32■■□□□ 1.16
IFT140-208ENST00000566818 IGKV6D-41A0A0C4DH26 115 aa22.31■■□□□ 1.16
IFT140-208ENST00000566818 SLC25A27O95847 323 aa22.31■■□□□ 1.16
IFT140-208ENST00000566818 NUCB1Q02818 461 aa22.31■■□□□ 1.16
IFT140-208ENST00000566818 CACNB2Q08289 660 aaPredicted RBP22.31■■□□□ 1.16
IFT140-208ENST00000566818 PPP4R3BQ5MIZ7 849 aa22.31■■□□□ 1.16
IFT140-208ENST00000566818 NCAPG2Q86XI2 1143 aa22.31■■□□□ 1.16
IFT140-208ENST00000566818 SLC5A4Q9NY91 659 aa22.31■■□□□ 1.16
IFT140-208ENST00000566818 CLIP2Q9UDT6 1046 aa22.31■■□□□ 1.16
IFT140-208ENST00000566818 MYH4Q9Y623 1939 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 TTLL1O95922 423 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 ADORA2AP29274 412 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 COPB2P35606 906 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 NECAB2Q7Z6G3 386 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 DPP9Q86TI2 863 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 ABRAQ8N0Z2 381 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 NEDD1Q8NHV4 660 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 CEP95Q96GE4 821 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 FBXO28Q9NVF7 368 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 MTMR4Q9NYA4 1195 aa22.3■■□□□ 1.16
IFT140-208ENST00000566818 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
IFT140-208ENST00000566818 F5H6K3 240 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 NDUFB10O96000 172 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 IGHDP01880 384 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 KLRC3Q07444 240 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 TMEM132BQ14DG7 1078 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 MCMDC2Q4G0Z9 681 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 RILPL2Q969X0 211 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 SLF1Q9BQI6 1058 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 ADAMTS5Q9UNA0 930 aa22.29■■□□□ 1.16
IFT140-208ENST00000566818 A0A0D9SFI3 127 aa22.28■■□□□ 1.16
IFT140-208ENST00000566818 VWA5AO00534 786 aa22.28■■□□□ 1.16
IFT140-208ENST00000566818 FOXP2O15409 715 aa22.28■■□□□ 1.16
IFT140-208ENST00000566818 TFAP4Q01664 338 aa22.28■■□□□ 1.16
IFT140-208ENST00000566818 PAWRQ96IZ0 340 aaKnown RBP22.28■■□□□ 1.16
IFT140-208ENST00000566818 OGDHLQ9ULD0 1010 aa22.28■■□□□ 1.16
IFT140-208ENST00000566818 NR2E3Q9Y5X4 410 aa22.28■■□□□ 1.16
IFT140-208ENST00000566818 COL11A1P12107 1806 aaPredicted RBP22.27■■□□□ 1.16
IFT140-208ENST00000566818 H0YGN5 161 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 FCER1AP12319 257 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 CCND3P30281 292 aaPredicted RBP22.27■■□□□ 1.16
IFT140-208ENST00000566818 MFAP1P55081 439 aaKnown RBP22.27■■□□□ 1.16
IFT140-208ENST00000566818 ALX1Q15699 326 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 FAM47AQ5JRC9 791 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 OLFML2BQ68BL8 750 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 RIOX2Q8IUF8 465 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 GMCL1P1Q8NEA9 526 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 NPLOC4Q8TAT6 608 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 MKL1Q969V6 931 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 FAM227BQ96M60 508 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 NUP88Q99567 741 aaPredicted RBP22.27■■□□□ 1.16
IFT140-208ENST00000566818 OSBPL3Q9H4L5 887 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 FLRT1Q9NZU1 646 aa22.27■■□□□ 1.16
IFT140-208ENST00000566818 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.27■■□□□ 1.16
IFT140-208ENST00000566818 CTDP1Q9Y5B0 961 aaPredicted RBP22.27■■□□□ 1.16
IFT140-208ENST00000566818 TSPY2A6NKD2 308 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 STAT3P40763 770 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 CTDSPL2Q05D32 466 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 NMIQ13287 307 aaPredicted RBP22.26■■□□□ 1.15
IFT140-208ENST00000566818 VPS53Q5VIR6 699 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 PLEKHM2Q8IWE5 1019 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 LRRC47Q8N1G4 583 aaKnown RBP22.26■■□□□ 1.15
IFT140-208ENST00000566818 DIS3LQ8TF46 1054 aaKnown RBP22.26■■□□□ 1.15
IFT140-208ENST00000566818 NBPF3Q9H094 633 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 ANAPC4Q9UJX5 808 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 ZMYM6O95789 1325 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 CCDC171Q6TFL3 1326 aa22.26■■□□□ 1.15
IFT140-208ENST00000566818 MSCO60682 206 aa22.25■■□□□ 1.15
IFT140-208ENST00000566818 SLC34A2O95436 690 aa22.25■■□□□ 1.15
IFT140-208ENST00000566818 PRPF38AQ8NAV1 312 aaKnown RBP22.25■■□□□ 1.15
IFT140-208ENST00000566818 MMP19Q99542 508 aa22.25■■□□□ 1.15
IFT140-208ENST00000566818 TEX13BQ9BXU2 312 aa22.25■■□□□ 1.15
IFT140-208ENST00000566818 C11orf49Q9H6J7 331 aa22.25■■□□□ 1.15
IFT140-208ENST00000566818 FEM1BQ9UK73 627 aa22.25■■□□□ 1.15
IFT140-208ENST00000566818 ZNF214Q9UL59 606 aaPredicted RBP22.25■■□□□ 1.15
IFT140-208ENST00000566818 EVI5O60447 810 aa22.24■■□□□ 1.15
IFT140-208ENST00000566818 KCTD2Q14681 263 aa22.24■■□□□ 1.15
IFT140-208ENST00000566818 SLFN13Q68D06 897 aa22.24■■□□□ 1.15
IFT140-208ENST00000566818 REPS2Q8NFH8 660 aa22.24■■□□□ 1.15
IFT140-208ENST00000566818 ISY1Q9ULR0 285 aaKnown RBP22.24■■□□□ 1.15
IFT140-208ENST00000566818 HIP1O00291 1037 aa22.23■■□□□ 1.15
IFT140-208ENST00000566818 ORC4O43929 436 aa22.23■■□□□ 1.15
IFT140-208ENST00000566818 ZBED4O75132 1171 aa22.23■■□□□ 1.15
IFT140-208ENST00000566818 CNGA1P29973 690 aa22.23■■□□□ 1.15
IFT140-208ENST00000566818 CYP2C19P33261 490 aa22.23■■□□□ 1.15
IFT140-208ENST00000566818 DIAPH3Q9NSV4 1193 aa22.23■■□□□ 1.15
IFT140-208ENST00000566818 STX8Q9UNK0 236 aa22.23■■□□□ 1.15
IFT140-208ENST00000566818 FRMPD3Q5JV73 1810 aa22.22■■□□□ 1.15
IFT140-208ENST00000566818 RANBP6O60518 1105 aaKnown RBP22.22■■□□□ 1.15
IFT140-208ENST00000566818 COBLO75128 1261 aa22.22■■□□□ 1.15
IFT140-208ENST00000566818 HSPD1P10809 573 aaKnown RBP22.22■■□□□ 1.15
IFT140-208ENST00000566818 BMP3P12645 472 aa22.22■■□□□ 1.15
IFT140-208ENST00000566818 SDSP20132 328 aa22.22■■□□□ 1.15
IFT140-208ENST00000566818 HABP4Q5JVS0 413 aaKnown RBP22.22■■□□□ 1.15
IFT140-208ENST00000566818 LHX8Q68G74 356 aa22.22■■□□□ 1.15
IFT140-208ENST00000566818 SNRNP48Q6IEG0 339 aaKnown RBP22.22■■□□□ 1.15
IFT140-208ENST00000566818 ZNF589Q86UQ0 364 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms