RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GSDMAQ96QA5 445 aa19.06■□□□□ 0.64
CMTM3-213ENST00000566756 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.06■□□□□ 0.64
CMTM3-213ENST00000566756 V9GYY5 206 aaPredicted RBP19.06■□□□□ 0.64
CMTM3-213ENST00000566756 EFCAB8A8MWE9 144 aa19.05■□□□□ 0.64
CMTM3-213ENST00000566756 BMS1Q14692 1282 aaKnown RBP19.05■□□□□ 0.64
CMTM3-213ENST00000566756 ERCC6LQ2NKX8 1250 aa19.05■□□□□ 0.64
CMTM3-213ENST00000566756 SPATA1Q5VX52 437 aa19.05■□□□□ 0.64
CMTM3-213ENST00000566756 STYK1Q6J9G0 422 aa19.05■□□□□ 0.64
CMTM3-213ENST00000566756 PANX2Q96RD6 677 aa19.05■□□□□ 0.64
CMTM3-213ENST00000566756 NAA15Q9BXJ9 866 aaKnown RBP19.05■□□□□ 0.64
CMTM3-213ENST00000566756 BAZ2AQ9UIF9 1905 aaKnown RBP19.05■□□□□ 0.64
CMTM3-213ENST00000566756 MINDY4BA8MYZ0 360 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 LDHBP07195 334 aaKnown RBP19.04■□□□□ 0.64
CMTM3-213ENST00000566756 IFIT1BQ5T764 474 aaKnown RBP19.04■□□□□ 0.64
CMTM3-213ENST00000566756 SDR42E1Q8WUS8 393 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 MED15Q96RN5 788 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 CTAGE1Q96RT6 745 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 ARGLU1Q9NWB6 273 aaPredicted RBP19.04■□□□□ 0.64
CMTM3-213ENST00000566756 MYH2Q9UKX2 1941 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 TRAPPC10P48553 1259 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 TROAPQ12815 778 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 UBXN4Q92575 508 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 TNFRSF25Q93038 417 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 GPR101Q96P66 508 aaPredicted RBP19.04■□□□□ 0.64
CMTM3-213ENST00000566756 TAOK2Q9UL54 1235 aa19.04■□□□□ 0.64
CMTM3-213ENST00000566756 C6orf229H3BNL8 230 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 ORC4O43929 436 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 TADA3O75528 432 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 DYNLL1P63167 89 aaKnown RBP19.03■□□□□ 0.64
CMTM3-213ENST00000566756 GSTO1P78417 241 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 CUL4BQ13620 913 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 DZIP1Q86YF9 867 aaKnown RBP19.03■□□□□ 0.64
CMTM3-213ENST00000566756 CMTR1Q8N1G2 835 aaKnown RBP19.03■□□□□ 0.64
CMTM3-213ENST00000566756 MNS1Q8NEH6 495 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 SHISA4Q96DD7 197 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 TMX4Q9H1E5 349 aaPredicted RBP19.03■□□□□ 0.64
CMTM3-213ENST00000566756 FAM205AQ6ZU69 1335 aa19.03■□□□□ 0.64
CMTM3-213ENST00000566756 H0YIN7 160 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 ATP8B1O43520 1251 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 COA1Q9GZY4 146 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 VPS54Q9P1Q0 977 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 MAP3K9P80192 1104 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 ATP2C1P98194 919 aaPredicted RBP19.02■□□□□ 0.64
CMTM3-213ENST00000566756 DPYDQ12882 1025 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 ARHGAP29Q52LW3 1261 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 CDKAL1Q5VV42 579 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 USP49Q70CQ1 688 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 APTXQ7Z2E3 356 aaKnown RBP19.02■□□□□ 0.64
CMTM3-213ENST00000566756 C2CD5Q86YS7 1000 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 PDILTQ8N807 584 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 TBC1D22AQ8WUA7 517 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 PAGE5Q96GU1 130 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 CRNKL1Q9BZJ0 848 aaKnown RBP19.02■□□□□ 0.64
CMTM3-213ENST00000566756 SAMSN1Q9NSI8 373 aaKnown RBP19.02■□□□□ 0.64
CMTM3-213ENST00000566756 ATP8A2Q9NTI2 1148 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 ZNF446Q9NWS9 450 aa19.02■□□□□ 0.64
CMTM3-213ENST00000566756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.02■□□□□ 0.64
CMTM3-213ENST00000566756 LAMB1P07942 1786 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 AKR1B15C9JRZ8 316 aaPredicted RBP19.01■□□□□ 0.63
CMTM3-213ENST00000566756 URI1O94763 535 aaPredicted RBP19.01■□□□□ 0.63
CMTM3-213ENST00000566756 LDHCP07864 332 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 CASQ1P31415 396 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 PBX1P40424 430 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 CERS3Q8IU89 383 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 DHX58Q96C10 678 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 SYNRGQ9UMZ2 1314 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 FANCGO15287 622 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 CLCN6P51797 869 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 PPP4CP60510 307 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 TRMT44Q8IYL2 757 aaKnown RBP19.01■□□□□ 0.63
CMTM3-213ENST00000566756 GRAMD1CQ8IYS0 662 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 SLC16A10Q8TF71 515 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 SYMPKQ92797 1274 aaKnown RBP19.01■□□□□ 0.63
CMTM3-213ENST00000566756 CCDC51Q96ER9 411 aa19.01■□□□□ 0.63
CMTM3-213ENST00000566756 V9GY48 417 aaPredicted RBP19.01■□□□□ 0.63
CMTM3-213ENST00000566756 ITIH6Q6UXX5 1313 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 SLX4Q8IY92 1834 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 A0A087X0B3 334 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 NPY5RQ15761 445 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 TTC38Q5R3I4 469 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 LRRN4CLQ8ND94 238 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 ADD3Q9UEY8 706 aaKnown RBP19■□□□□ 0.63
CMTM3-213ENST00000566756 JAG2Q9Y219 1238 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 CNTNAP5Q8WYK1 1306 aa19■□□□□ 0.63
CMTM3-213ENST00000566756 FECHP22830 423 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 FILIP1LQ4L180 1135 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 CTR9Q6PD62 1173 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 DPP8Q6V1X1 898 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-213ENST00000566756 CCDC125Q86Z20 511 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
CMTM3-213ENST00000566756 EPSTI1Q96J88 318 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 ZC3H12CQ9C0D7 883 aaKnown RBP18.99■□□□□ 0.63
CMTM3-213ENST00000566756 ZRANB2O95218 330 aaKnown RBP eCLIP18.99■□□□□ 0.63
CMTM3-213ENST00000566756 PLEKHA8P1O95397 391 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 CCDC175P0C221 793 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 ATP2B1P20020 1258 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms