RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 TDO2P48775 406 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 OLFML2BQ68BL8 750 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 NCAPG2Q86XI2 1143 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
SMPD3-208ENST00000566723 MKNK2Q9HBH9 465 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 DDX20Q9UHI6 824 aaKnown RBP18.17■□□□□ 0.5
SMPD3-208ENST00000566723 A0A1W2PPC1 479 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 CYBAP13498 195 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 MX1P20591 662 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 TMEM132BQ14DG7 1078 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 ABRAQ8N0Z2 381 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 STK11IPQ8N1F8 1099 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 FSD1Q9BTV5 496 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 SLC5A4Q9NY91 659 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 PPP1R9AQ9ULJ8 1098 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 ADAMTS5Q9UNA0 930 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
SMPD3-208ENST00000566723 RAD21O60216 631 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 COBLO75128 1261 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 SLC25A27O95847 323 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 FAM83BQ5T0W9 1011 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 TRPV1Q8NER1 839 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 NYAP2Q9P242 653 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 ZMYND8Q9ULU4 1186 aaPredicted RBP18.15■□□□□ 0.5
SMPD3-208ENST00000566723 SALL3Q9BXA9 1300 aa18.15■□□□□ 0.5
SMPD3-208ENST00000566723 VWA5AO00534 786 aa18.14■□□□□ 0.49
SMPD3-208ENST00000566723 APPP05067 770 aa18.14■□□□□ 0.49
SMPD3-208ENST00000566723 CNGA1P29973 690 aa18.14■□□□□ 0.49
SMPD3-208ENST00000566723 CRBNQ96SW2 442 aa18.14■□□□□ 0.49
SMPD3-208ENST00000566723 STAP2Q9UGK3 403 aa18.14■□□□□ 0.49
SMPD3-208ENST00000566723 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
SMPD3-208ENST00000566723 IGKV6D-41A0A0C4DH26 115 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 PATL2C9JE40 543 aaKnown RBP18.13■□□□□ 0.49
SMPD3-208ENST00000566723 FCER1AP12319 257 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 ZMYM1Q5SVZ6 1142 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 RIOX2Q8IUF8 465 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 IFNL3Q8IZI9 196 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 REPS2Q8NFH8 660 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 SEC62Q99442 399 aaKnown RBP18.13■□□□□ 0.49
SMPD3-208ENST00000566723 GDF15Q99988 308 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 NACAP1Q9BZK3 213 aa18.13■□□□□ 0.49
SMPD3-208ENST00000566723 ZNF214Q9UL59 606 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-208ENST00000566723 PRDM1O75626 825 aa18.12■□□□□ 0.49
SMPD3-208ENST00000566723 NDUFB10O96000 172 aa18.12■□□□□ 0.49
SMPD3-208ENST00000566723 COPB2P35606 906 aa18.12■□□□□ 0.49
SMPD3-208ENST00000566723 LRRC26Q2I0M4 334 aa18.12■□□□□ 0.49
SMPD3-208ENST00000566723 ZNF444Q8N0Y2 327 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-208ENST00000566723 MAML3Q96JK9 1138 aa18.12■□□□□ 0.49
SMPD3-208ENST00000566723 MMP19Q99542 508 aa18.12■□□□□ 0.49
SMPD3-208ENST00000566723 NUP88Q99567 741 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-208ENST00000566723 SLF1Q9BQI6 1058 aa18.12■□□□□ 0.49
SMPD3-208ENST00000566723 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-208ENST00000566723 MCM3APO60318 1980 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 F5H6K3 240 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 DNM1LO00429 736 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 SEPT4O43236 478 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 SYN1P17600 705 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 STAT3P40763 770 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 KLRC3Q07444 240 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 CEP95Q96GE4 821 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 NAPBQ9H115 298 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 SYNPO2Q9UMS6 1093 aa18.11■□□□□ 0.49
SMPD3-208ENST00000566723 BMP8BP34820 402 aa18.1■□□□□ 0.49
SMPD3-208ENST00000566723 PDE4BQ07343 736 aa18.1■□□□□ 0.49
SMPD3-208ENST00000566723 HDAC1Q13547 482 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-208ENST00000566723 ANKRD45Q5TZF3 282 aa18.1■□□□□ 0.49
SMPD3-208ENST00000566723 TEX13BQ9BXU2 312 aa18.1■□□□□ 0.49
SMPD3-208ENST00000566723 MTMR4Q9NYA4 1195 aa18.1■□□□□ 0.49
SMPD3-208ENST00000566723 CLIP2Q9UDT6 1046 aa18.1■□□□□ 0.49
SMPD3-208ENST00000566723 LTBP2Q14767 1821 aa18.09■□□□□ 0.49
SMPD3-208ENST00000566723 TTLL1O95922 423 aa18.09■□□□□ 0.49
SMPD3-208ENST00000566723 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
SMPD3-208ENST00000566723 MAGEA10P43363 369 aaPredicted RBP18.09■□□□□ 0.49
SMPD3-208ENST00000566723 PPARAQ07869 468 aa18.09■□□□□ 0.49
SMPD3-208ENST00000566723 KCTD2Q14681 263 aa18.09■□□□□ 0.49
SMPD3-208ENST00000566723 SENP6Q9GZR1 1112 aaPredicted RBP18.09■□□□□ 0.49
SMPD3-208ENST00000566723 PGK2P07205 417 aa18.08■□□□□ 0.48
SMPD3-208ENST00000566723 TSPY3P0CV98 308 aa18.08■□□□□ 0.48
SMPD3-208ENST00000566723 TSPY8P0CW00 308 aa18.08■□□□□ 0.48
SMPD3-208ENST00000566723 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
SMPD3-208ENST00000566723 LRRC47Q8N1G4 583 aaKnown RBP18.08■□□□□ 0.48
SMPD3-208ENST00000566723 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
SMPD3-208ENST00000566723 GMCL1P1Q8NEA9 526 aa18.08■□□□□ 0.48
SMPD3-208ENST00000566723 NEDD1Q8NHV4 660 aa18.08■□□□□ 0.48
SMPD3-208ENST00000566723 MKL1Q969V6 931 aa18.08■□□□□ 0.48
SMPD3-208ENST00000566723 NRBP1Q9UHY1 535 aa18.08■□□□□ 0.48
SMPD3-208ENST00000566723 DIS3Q9Y2L1 958 aaKnown RBP18.08■□□□□ 0.48
SMPD3-208ENST00000566723 FOXP2O15409 715 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 ZNF792Q3KQV3 632 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 PRAMEF19Q5SWL8 479 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 ANO1Q5XXA6 986 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 CCDC129Q6ZRS4 1044 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 ARRDC4Q8NCT1 418 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 EVI5LQ96CN4 794 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 TINF2Q9BSI4 451 aa18.07■□□□□ 0.48
SMPD3-208ENST00000566723 KBTBD13C9JR72 458 aa18.06■□□□□ 0.48
SMPD3-208ENST00000566723 SOX1O00570 391 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-208ENST00000566723 ATP2A1O14983 1001 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms