RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 KCNJ14Q9UNX9 436 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 V9GY48 417 aaPredicted RBP12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 BTBD18B2RXH4 712 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 ZNF287Q9HBT7 754 aa12.4□□□□□ -0.42
PDXDC1-214ENST00000566633 DEXIO95424 95 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 HLA-DOAP06340 250 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 SHMT1P34896 483 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 SYKP43405 635 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 NLRP12P59046 1061 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 RESP18Q5W5W9 173 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 ARHGAP27Q6ZUM4 889 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 DGKHQ86XP1 1220 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 CACTINQ8WUQ7 758 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 CLIC6Q96NY7 704 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 DYNC1I1O14576 645 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 CUTAO60888 179 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 TOB1P50616 345 aaPredicted RBP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 DIS3L2Q8IYB7 885 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 MYRIPQ8NFW9 859 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 CTCFLQ8NI51 663 aaPredicted RBP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 FOXP1Q9H334 677 aaPredicted RBP12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 HDAC9Q9UKV0 1011 aa12.39□□□□□ -0.43
PDXDC1-214ENST00000566633 KIF13BQ9NQT8 1826 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 RRP9O43818 475 aaKnown RBP12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 BIN1O00499 593 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 GDF11O95390 407 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 FUT2Q10981 343 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 SHISA4Q96DD7 197 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 VPS54Q9P1Q0 977 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 TUBE1Q9UJT0 475 aa12.38□□□□□ -0.43
PDXDC1-214ENST00000566633 WNT10BO00744 389 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 RAD21O60216 631 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 LRRC8AQ8IWT6 810 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 NAV1Q8NEY1 1877 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 TMEM39BQ9GZU3 492 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 VPS33BQ9H267 617 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 BAZ2BQ9UIF8 2168 aaKnown RBP12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 DDAH1O94760 285 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 HSP90AA2PQ14568 343 aaPredicted RBP12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 PKN1Q16512 942 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 MIGA2Q7L4E1 593 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
PDXDC1-214ENST00000566633 JAG1P78504 1218 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 NCAPHQ15003 741 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 RILPL1Q5EBL4 403 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 RNF26Q9BY78 433 aaPredicted RBP12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 MYOZ2Q9NPC6 264 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 MTMR4Q9NYA4 1195 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 MAD2L2Q9UI95 211 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 CDK5RAP2Q96SN8 1893 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 DDX60LQ5H9U9 1706 aaKnown RBP12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 NEMFO60524 1076 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 CALM1P0DP23 149 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 CALM2P0DP24 149 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 CALM3P0DP25 149 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 RRP1BQ14684 758 aaKnown RBP12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 SLC35G1Q2M3R5 365 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 SYT17Q9BSW7 474 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 TMOD2Q9NZR1 351 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 LAMB1P07942 1786 aa12.36□□□□□ -0.43
PDXDC1-214ENST00000566633 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 ZNF541Q9H0D2 1346 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 GTF2F1P35269 517 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms