RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 DACH1Q9UI36 760 aa21.3■■□□□ 1
MSLN-207ENST00000566549 PICALMQ13492 652 aa21.29■■□□□ 1
MSLN-207ENST00000566549 ZNF710Q8N1W2 664 aa21.29■■□□□ 1
MSLN-207ENST00000566549 SPATA20Q8TB22 786 aa21.29■■□□□ 1
MSLN-207ENST00000566549 BLZF1Q9H2G9 400 aa21.29■■□□□ 1
MSLN-207ENST00000566549 CALML3P27482 149 aa21.29■■□□□ 1
MSLN-207ENST00000566549 RHBDL3P58872 404 aa21.29■■□□□ 1
MSLN-207ENST00000566549 SLC27A3Q5K4L6 730 aa21.29■■□□□ 1
MSLN-207ENST00000566549 E4F1Q66K89 784 aaPredicted RBP21.29■■□□□ 1
MSLN-207ENST00000566549 ANKS1AQ92625 1134 aa21.29■■□□□ 1
MSLN-207ENST00000566549 CCDC34Q96HJ3 373 aa21.29■■□□□ 1
MSLN-207ENST00000566549 PCDHA4Q9UN74 947 aa21.29■■□□□ 1
MSLN-207ENST00000566549 TOP1P11387 765 aaKnown RBP21.28■■□□□ 1
MSLN-207ENST00000566549 HOMER1Q86YM7 354 aa21.28■■□□□ 1
MSLN-207ENST00000566549 VSTM4Q8IW00 320 aa21.28■■□□□ 1
MSLN-207ENST00000566549 TRIML1Q8N9V2 468 aa21.28■■□□□ 1
MSLN-207ENST00000566549 PPEF1O14829 653 aaPredicted RBP21.28■■□□□ 1
MSLN-207ENST00000566549 COBLO75128 1261 aa21.28■■□□□ 1
MSLN-207ENST00000566549 CD44P16070 742 aaKnown RBP21.28■■□□□ 1
MSLN-207ENST00000566549 KRT27Q7Z3Y8 459 aa21.28■■□□□ 1
MSLN-207ENST00000566549 ENOX1Q8TC92 643 aaKnown RBP21.28■■□□□ 1
MSLN-207ENST00000566549 CCDC194A0A1B0GVG4 234 aa21.27■■□□□ 1
MSLN-207ENST00000566549 TRAPPC10P48553 1259 aa21.27■■□□□ 1
MSLN-207ENST00000566549 USP17L2Q6R6M4 530 aa21.27■■□□□ 1
MSLN-207ENST00000566549 NYAP1Q6ZVC0 841 aa21.27■■□□□ 1
MSLN-207ENST00000566549 C16orf86Q6ZW13 317 aa21.27■■□□□ 1
MSLN-207ENST00000566549 PDCL3Q9H2J4 239 aa21.27■■□□□ 1
MSLN-207ENST00000566549 TCP11L1Q9NUJ3 509 aa21.27■■□□□ 1
MSLN-207ENST00000566549 PODXL2Q9NZ53 605 aa21.27■■□□□ 1
MSLN-207ENST00000566549 MORC2Q9Y6X9 1032 aaPredicted RBP21.27■■□□□ 1
MSLN-207ENST00000566549 UBR3Q6ZT12 1888 aa21.27■■□□□ 1
MSLN-207ENST00000566549 SNED1Q8TER0 1413 aa21.27■■□□□ 1
MSLN-207ENST00000566549 KLRF2D3W0D1 207 aa21.27■■□□□ 1
MSLN-207ENST00000566549 HOXA10P31260 410 aaPredicted RBP21.27■■□□□ 1
MSLN-207ENST00000566549 GNAQP50148 359 aa21.27■■□□□ 1
MSLN-207ENST00000566549 DPYDQ12882 1025 aa21.27■■□□□ 1
MSLN-207ENST00000566549 SH3RF1Q7Z6J0 888 aa21.27■■□□□ 1
MSLN-207ENST00000566549 PROM2Q8N271 834 aa21.27■■□□□ 1
MSLN-207ENST00000566549 ZNF287Q9HBT7 754 aa21.27■■□□□ 1
MSLN-207ENST00000566549 INF2Q27J81 1249 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 CCDC178Q5BJE1 867 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 CEP95Q96GE4 821 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 MXD3Q9BW11 206 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 VAT1LQ9HCJ6 419 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 PCDHA6Q9UN73 950 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 PCDHA8Q9Y5H6 950 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 PALM3A6NDB9 673 aaPredicted RBP21.26■□□□□ 0.99
MSLN-207ENST00000566549 ZNF18P17022 549 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 CCDC112Q8NEF3 446 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 DAGLAQ9Y4D2 1042 aa21.26■□□□□ 0.99
MSLN-207ENST00000566549 NRDCO43847 1150 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 SH3GLB2Q9NR46 395 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 NAV1Q8NEY1 1877 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 STXBP3O00186 592 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 PLCG2P16885 1265 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 E2F4Q16254 413 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 IQUBQ8NA54 791 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 TBC1D22AQ8WUA7 517 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 PPP1R13BQ96KQ4 1090 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 CRAMP1Q96RY5 1269 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 BARHL2Q9NY43 387 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 PAXBP1Q9Y5B6 917 aa21.25■□□□□ 0.99
MSLN-207ENST00000566549 PP2D1A8MPX8 630 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 IGSF3O75054 1194 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 EIF6P56537 245 aaKnown RBP21.24■□□□□ 0.99
MSLN-207ENST00000566549 SYNRGQ9UMZ2 1314 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 MYO1BO43795 1136 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 CUL4BQ13620 913 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 KARSQ15046 597 aaKnown RBP21.24■□□□□ 0.99
MSLN-207ENST00000566549 DOK7Q18PE1 504 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 C4orf32Q8N8J7 132 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 CCDC148Q8NFR7 591 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 NEDD1Q8NHV4 660 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 MTRQ99707 1265 aa21.24■□□□□ 0.99
MSLN-207ENST00000566549 PARP1P09874 1014 aaKnown RBP21.23■□□□□ 0.99
MSLN-207ENST00000566549 NAPAP54920 295 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 CERS3Q8IU89 383 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 CLEC10AQ8IUN9 316 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 SLF2Q8IX21 1173 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 TMEM60Q9H2L4 133 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 GAKO14976 1311 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 M0R2N6 131 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 ERCC5P28715 1186 aaPredicted RBP21.23■□□□□ 0.99
MSLN-207ENST00000566549 NAA30Q147X3 362 aaPredicted RBP21.23■□□□□ 0.99
MSLN-207ENST00000566549 PDXDC2PQ6P474 469 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 RASSF8Q8NHQ8 419 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 GSDMAQ96QA5 445 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 PLIN2Q99541 437 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 UBA5Q9GZZ9 404 aa21.23■□□□□ 0.99
MSLN-207ENST00000566549 SCNN1DP51172 638 aa21.22■□□□□ 0.99
MSLN-207ENST00000566549 USP17L5A8MUK1 530 aa21.21■□□□□ 0.99
MSLN-207ENST00000566549 NT5C2P49902 561 aa21.21■□□□□ 0.99
MSLN-207ENST00000566549 ADKP55263 362 aaKnown RBP21.21■□□□□ 0.99
MSLN-207ENST00000566549 SP8Q8IXZ3 490 aa21.21■□□□□ 0.99
MSLN-207ENST00000566549 CERS5Q8N5B7 392 aa21.21■□□□□ 0.99
MSLN-207ENST00000566549 FAM163AQ96GL9 167 aaPredicted RBP21.21■□□□□ 0.99
MSLN-207ENST00000566549 CTNND2Q9UQB3 1225 aa21.21■□□□□ 0.99
MSLN-207ENST00000566549 FRMPD2Q68DX3 1309 aaPredicted RBP21.21■□□□□ 0.99
MSLN-207ENST00000566549 CTIFO43310 598 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms