RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 A0A0G2JLL6 359 aaPredicted RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 MANSC4A6NHS7 340 aaPredicted RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 CDKL5O76039 1030 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 CD2BP2O95400 341 aaKnown RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 HSP90AA1P07900 732 aaKnown RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 SNHG28P0DPA3 235 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 CETPP11597 493 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 AKAP17AQ02040 695 aaKnown RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 ZNF543Q08ER8 600 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 GADL1Q6ZQY3 521 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 KCTD1Q719H9 257 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 PRRT2Q7Z6L0 340 aaPredicted RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 RASAL3Q86YV0 1011 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 PROCA1Q8NCQ7 364 aaPredicted RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 CHURC1Q8WUH1 139 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.06□□□□□ -0.96
CDH1-208ENST00000565810 LAMB1P07942 1786 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 PAPPA2Q9BXP8 1791 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 CDK5RAP2Q96SN8 1893 aa9.06□□□□□ -0.96
CDH1-208ENST00000565810 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
CDH1-208ENST00000565810 CCL15-CCL14A0A0B4J2E2 113 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 PALM3A6NDB9 673 aaPredicted RBP9.05□□□□□ -0.96
CDH1-208ENST00000565810 RASSF10A6NK89 507 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 TMEM232C9JQI7 657 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 KLRF2D3W0D1 207 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 SLC10A3P09131 477 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 GOLGA8HP0CJ92 632 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 VCAM1P19320 739 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 OSBPP22059 807 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 SMARCA1P28370 1054 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
CDH1-208ENST00000565810 GJA5P36382 358 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 INHBEP58166 350 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 SCRN1Q12765 414 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 GRM1Q13255 1194 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 CCL15Q16663 113 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 FAM83BQ5T0W9 1011 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 OTUD7BQ6GQQ9 843 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 FAM160B2Q86V87 743 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 CCDC83Q8IWF9 413 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 NECAB1Q8N987 351 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 GTF3C6Q969F1 213 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 TANGO6Q9C0B7 1094 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 RPAP3Q9H6T3 665 aaPredicted RBP9.05□□□□□ -0.96
CDH1-208ENST00000565810 GPCPD1Q9NPB8 672 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 MAD2L2Q9UI95 211 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 HPS5Q9UPZ3 1129 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 CTDP1Q9Y5B0 961 aaPredicted RBP9.05□□□□□ -0.96
CDH1-208ENST00000565810 LAMA4Q16363 1823 aa9.05□□□□□ -0.96
CDH1-208ENST00000565810 POLR2AP24928 1970 aaKnown RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 SIPA1L1O43166 1804 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 PLA2G6O60733 806 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 FLOT1O75955 427 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 LARGE1O95461 756 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 STAT2P52630 851 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 HMGN5P82970 282 aaKnown RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 SSRP1Q08945 709 aaKnown RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 SREBF2Q12772 1141 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 NOGQ13253 232 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 KIAA1755Q5JYT7 1200 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 SAMD1Q6SPF0 538 aaPredicted RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 TMTC3Q6ZXV5 915 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 TRIM22Q8IYM9 498 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 PRPF38AQ8NAV1 312 aaKnown RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 NUP88Q99567 741 aaPredicted RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 LLPHQ9BRT6 129 aaKnown RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 UBA5Q9GZZ9 404 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 NCOA5Q9HCD5 579 aaKnown RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 VAT1LQ9HCJ6 419 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 HOXC10Q9NYD6 342 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 RBM27Q9P2N5 1060 aaKnown RBP9.04□□□□□ -0.96
CDH1-208ENST00000565810 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 AGTPBP1Q9UPW5 1226 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 KIF3AQ9Y496 699 aa9.04□□□□□ -0.96
CDH1-208ENST00000565810 NID2Q14112 1375 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 ZBED4O75132 1171 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 FDX1P10109 184 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 IFNAR1P17181 557 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 CDC27P30260 824 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 HOXA7P31268 230 aaPredicted RBP9.03□□□□□ -0.96
CDH1-208ENST00000565810 C1QTNF8P60827 252 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 IRX3P78415 501 aaPredicted RBP9.03□□□□□ -0.96
CDH1-208ENST00000565810 DGKZQ13574 1117 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 CUL4AQ13619 759 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms