RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 CEP95Q96GE4 821 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 SUPT16HQ9Y5B9 1047 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 TACC3Q9Y6A5 838 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 DNAH12Q6ZR08 3092 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 A0A0D9SFI3 127 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 F5H6K3 240 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 COBLO75128 1261 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 HOXC6P09630 235 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 CTDSPL2Q05D32 466 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 KLRC3Q07444 240 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 TRMT44Q8IYL2 757 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 LRRC47Q8N1G4 583 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 MB21D1Q8N884 522 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 HTATIP2Q9BUP3 242 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 ADAMTS5Q9UNA0 930 aa13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-210ENST00000565626 GREB1LQ9C091 1923 aaPredicted RBP13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 VWA5AO00534 786 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 IRX6P78412 446 aaPredicted RBP13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 TFAP4Q01664 338 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 NUCB1Q02818 461 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 AAMPQ13685 434 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 HABP4Q5JVS0 413 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 LHX8Q68G74 356 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 DPP9Q86TI2 863 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 ZNF589Q86UQ0 364 aaPredicted RBP13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 SHCBP1Q8NEM2 672 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
NSMCE1-210ENST00000565626 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 IGHA2P01877 340 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 PDE4BQ07343 736 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 NMIQ13287 307 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 MFSD14CQ5VZR4 134 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 REPS2Q8NFH8 660 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 NEDD1Q8NHV4 660 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 RILPL2Q969X0 211 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 MROH8Q9H579 483 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 HELLSQ9NRZ9 838 aa13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 ZNF214Q9UL59 606 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
NSMCE1-210ENST00000565626 STRNO43815 780 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 EVI5O60447 810 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 NMT2O60551 498 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 TTLL1O95922 423 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 PGK2P07205 417 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 CNGA1P29973 690 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 STAT3P40763 770 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 PRAMEF19Q5SWL8 479 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 MKL1Q969V6 931 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 RIPK3Q9Y572 518 aa13.01□□□□□ -0.33
NSMCE1-210ENST00000565626 PARP14Q460N5 1801 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 PLIN4Q96Q06 1357 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 PFASO15067 1338 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 FGAP02671 866 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 SLC4A3P48751 1232 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 MCMDC2Q4G0Z9 681 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 ANO1Q5XXA6 986 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 SLFN13Q68D06 897 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 KIFC2Q96AC6 838 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 MMP19Q99542 508 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 C11orf49Q9H6J7 331 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 IL17RBQ9NRM6 502 aa13□□□□□ -0.33
NSMCE1-210ENST00000565626 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 SLC25A27O95847 323 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 HSPD1P10809 573 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 FCER1AP12319 257 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 CYBAP13498 195 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 CAPN2P17655 700 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 HAND2P61296 217 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 ALX1Q15699 326 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 C7orf61Q8IZ16 206 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 ABRAQ8N0Z2 381 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 CPXCR1Q8N123 301 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 GMCL1P1Q8NEA9 526 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms