RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 FAM184BQ9ULE4 1060 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 DIS3Q9Y2L1 958 aaKnown RBP11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 XIRP2A4UGR9 3374 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 MYH2Q9UKX2 1941 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 ARVCFO00192 962 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 SLC25A27O95847 323 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 ZNF865P0CJ78 1059 aaPredicted RBP11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 TAL1P17542 331 aaPredicted RBP11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 FOXK2Q01167 660 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 ABCB5Q2M3G0 1257 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 NAA16Q6N069 864 aaPredicted RBP11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 GJD3Q8N144 294 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 ACER1Q8TDN7 264 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 FBXL18Q96ME1 805 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 TANGO6Q9C0B7 1094 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 MRS2Q9HD23 443 aa11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
VPS9D1-205ENST00000565452 CACNA1FO60840 1977 aa11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 A0A1B0GUL7 405 aa11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 RFXAPO00287 272 aa11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 KCTD2Q14681 263 aa11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 CCSAPQ6IQ19 270 aaPredicted RBP11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 MMP19Q99542 508 aa11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 FLT1P17948 1338 aa11.09□□□□□ -0.63
VPS9D1-205ENST00000565452 DUSP11O75319 330 aaKnown RBP11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 MYOGP15173 224 aa11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 ATP2A2P16615 1042 aaKnown RBP11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 DSG3P32926 999 aa11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 MSL3Q8N5Y2 521 aaKnown RBP11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 CD320Q9NPF0 282 aa11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 PTPRCP08575 1304 aa11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 SYNRGQ9UMZ2 1314 aa11.08□□□□□ -0.64
VPS9D1-205ENST00000565452 ZBBXA8MT70 800 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 ST18O60284 1047 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 CD4P01730 458 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 PGK2P07205 417 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 ASGR1P07306 291 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 C6orf222P0C671 652 aaPredicted RBP11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 UBTFL1P0CB47 393 aaPredicted RBP11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 CST5P28325 142 aaPredicted RBP11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 SSTR3P32745 418 aaPredicted RBP11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 ZNF792Q3KQV3 632 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 GNASQ5JWF2 1037 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 HIPK3Q9H422 1215 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 CERS4Q9HA82 394 aa11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 PA2G4Q9UQ80 394 aaKnown RBP11.07□□□□□ -0.64
VPS9D1-205ENST00000565452 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 IGSF3O75054 1194 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 UQCRFS1P1P0C7P4 283 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 CCL23P55773 120 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 TFCP2Q12800 502 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 PI16Q6UXB8 463 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 FAM178BQ8IXR5 827 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 ARNTL2Q8WYA1 636 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 LENG1Q96BZ8 264 aaPredicted RBP11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 EHD4Q9H223 541 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 LMCD1Q9NZU5 365 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 FRMPD3Q5JV73 1810 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 PLXNA1Q9UIW2 1896 aa11.06□□□□□ -0.64
VPS9D1-205ENST00000565452 FLOT1O75955 427 aa11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 CA3P07451 260 aa11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 ARID4AP29374 1257 aaPredicted RBP11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 USP5P45974 858 aa11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 KRT40Q6A162 431 aa11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 CERS3Q8IU89 383 aa11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 MFSD14AQ96MC6 490 aa11.05□□□□□ -0.64
VPS9D1-205ENST00000565452 CHD7Q9P2D1 2997 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 ROBO3Q96MS0 1386 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 PRRC2BQ5JSZ5 2229 aaKnown RBP11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 PFKMP08237 780 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 COPB2P35606 906 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 STAT3P40763 770 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 GJA9P57773 515 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 TMEM132BQ14DG7 1078 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 SEPT2Q15019 361 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 CCDC184Q52MB2 194 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 RIOX2Q8IUF8 465 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 MIER1Q8N108 512 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 ATG4CQ96DT6 458 aa11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
VPS9D1-205ENST00000565452 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 MYADML2A6NDP7 307 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 DCXO43602 365 aa11.03□□□□□ -0.64
VPS9D1-205ENST00000565452 CABYRO75952 493 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms