RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 LLGL1Q15334 1064 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 PIK3AP1Q6ZUJ8 805 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 NSUN7Q8NE18 718 aaKnown RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 TNMDQ9H2S6 317 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 KCNF1Q9H3M0 494 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 MMRN2Q9H8L6 949 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 AKAP11Q9UKA4 1901 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 GOLGA8AA7E2F4 631 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 SFI1A8K8P3 1242 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 DDX39AO00148 427 aaKnown RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 OFD1O75665 1012 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 PLS1Q14651 629 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 KSR1Q8IVT5 923 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 LRP6O75581 1613 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 BECN2A8MW95 431 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 ADD2P35612 726 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 IL15P40933 162 aaPredicted RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 PDE4BQ07343 736 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 PPP1R18Q6NYC8 613 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 NUMBP49757 651 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 NFIAQ12857 509 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 SMYD5Q6GMV2 418 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 RNF19AQ9NV58 838 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 ZBTB21Q9ULJ3 1066 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 CCDC69A6NI79 296 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 TSPY2A6NKD2 308 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 DKC1O60832 514 aaKnown RBP eCLIP3.79□□□□□ -1.82e-6■■■□□ 16.1
CHD9-213ENST00000564845 ALDH1L1O75891 902 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 ZMYM1Q5SVZ6 1142 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 POTEAQ6S8J7 498 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 VGLL2Q8N8G2 317 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 GJD4Q96KN9 370 aaPredicted RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 TRIM5Q9C035 493 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 COPRSQ9NQ92 184 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 IRS2Q9Y4H2 1338 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 RIC1Q4ADV7 1423 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 SNED1Q8TER0 1413 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 VWA3AA6NCI4 1184 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 AKNAD1Q5T1N1 836 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 FAM81BQ96LP2 452 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 HOMER2Q9NSB8 354 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 SALL1Q9NSC2 1324 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 ZNF831Q5JPB2 1677 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 SERPINB2P05120 415 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 PSMA4P25789 261 aaKnown RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 EIF5P55010 431 aaKnown RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 JAG1P78504 1218 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 BMS1Q14692 1282 aaKnown RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 CCDC186Q7Z3E2 898 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 HEATR3Q7Z4Q2 680 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 RGS22Q8NE09 1264 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 AKT1S1Q96B36 256 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 IRX2Q9BZI1 471 aaPredicted RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 SSTR3P32745 418 aaPredicted RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 SF3A3Q12874 501 aaKnown RBP eCLIP3.79□□□□□ -1.8
CHD9-213ENST00000564845 IKQ13123 557 aaPredicted RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 TPD52L1Q16890 204 aaPredicted RBP3.79□□□□□ -1.8
CHD9-213ENST00000564845 TRAPPC3LQ5T215 181 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 SPATA24Q86W54 205 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 FSIP1Q8NA03 581 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 GLIS3Q8NEA6 775 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 TEKT1Q969V4 418 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 DHX58Q96C10 678 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 TSPY26PQ9H489 355 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 PCDHA7Q9UN72 937 aa3.79□□□□□ -1.8
CHD9-213ENST00000564845 CFAP47Q6ZTR5 3102 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 MAGEB6P1A0A0J9YX57 407 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 GBP1P32455 592 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 EVCP57679 992 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 DDR1Q08345 913 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 CTAGE1Q96RT6 745 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 SDF4Q9BRK5 362 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 TCHPQ9BT92 498 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 GLIS2Q9BZE0 524 aaPredicted RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 UTP6Q9NYH9 597 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 SLC12A7Q9Y666 1083 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 ZMYM2Q9UBW7 1377 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 BCL9O00512 1426 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 ADKP55263 362 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 GSTO1P78417 241 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 KLHL40Q2TBA0 621 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PPFIBP2Q8ND30 876 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 C8orf76Q96K31 380 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 DAAM1Q9Y4D1 1078 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 SH3TC1Q8TE82 1336 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 F8W8V4 182 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 HS1BP3Q53T59 392 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 LRSAM1Q6UWE0 723 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 RASSF8Q8NHQ8 419 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 NCAPGQ9BPX3 1015 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 SWAP70Q9UH65 585 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 SPENQ96T58 3664 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 TCRBV5S4A2TA0A5A2 114 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 ARHGEF37A1IGU5 675 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 TRIM49BA6NDI0 452 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 POLR2DO15514 142 aaKnown RBP3.78□□□□□ -1.8
CHD9-213ENST00000564845 EPS15P42566 896 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 PRR5LQ6MZQ0 368 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 TYW1BQ6NUM6 668 aa3.78□□□□□ -1.8
CHD9-213ENST00000564845 MFSD6Q6ZSS7 791 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms