RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 BRPF3Q9ULD4 1205 aa14.61□□□□□ -0.07
KARS-204ENST00000564578 USP17L15C9J2P7 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L13C9JLJ4 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L11C9JVI0 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L18D6R9N7 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L22D6RA61 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L17D6RBQ6 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L19D6RCP7 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L20D6RJB6 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 SLC1A4P43007 532 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 USP17L24Q0WX57 530 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 R3HDMLQ9H3Y0 253 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 FBXO28Q9NVF7 368 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 BMP3P12645 472 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 MAP2K1Q02750 393 aaPredicted RBP14.6□□□□□ -0.07
KARS-204ENST00000564578 OTUD7BQ6GQQ9 843 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 KCTD1Q719H9 257 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 BRF1Q92994 677 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 P2RX7Q99572 595 aaKnown RBP14.6□□□□□ -0.07
KARS-204ENST00000564578 MYL10Q9BUA6 226 aa14.6□□□□□ -0.07
KARS-204ENST00000564578 TRPA1O75762 1119 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 NEK4P51957 841 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 EVCP57679 992 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 ZNF543Q08ER8 600 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 CRHR2Q13324 411 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 APOA5Q6Q788 366 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 ZNF654Q8IZM8 581 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 DCAF4Q8WV16 495 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 TANGO6Q9C0B7 1094 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 PDRG1Q9NUG6 133 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 FRMPD2Q68DX3 1309 aaPredicted RBP14.59□□□□□ -0.07
KARS-204ENST00000564578 RLFQ13129 1914 aa14.59□□□□□ -0.07
KARS-204ENST00000564578 CA12O43570 354 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 ALDH1A1P00352 501 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 GOLGA8HP0CJ92 632 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 APOBRQ0VD83 1088 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 COG2Q14746 738 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 TAF1CQ15572 869 aaPredicted RBP14.58□□□□□ -0.07
KARS-204ENST00000564578 TTBK2Q6IQ55 1244 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 STAG2Q8N3U4 1231 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.07
KARS-204ENST00000564578 CFHR5Q9BXR6 569 aa14.58□□□□□ -0.07
KARS-204ENST00000564578 ALDH8A1Q9H2A2 487 aaPredicted RBP14.58□□□□□ -0.07
KARS-204ENST00000564578 ADGRA2Q96PE1 1338 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 CCDC69A6NI79 296 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 SPDYE16A6NNV3 312 aaPredicted RBP14.58□□□□□ -0.08
KARS-204ENST00000564578 TMEM232C9JQI7 657 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 FLOT1O75955 427 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 TBC1D8O95759 1140 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 RXRAP19793 462 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 HERVK_113P62684 666 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 PABPC4Q13310 644 aaKnown RBP eCLIP14.58□□□□□ -0.087e-18■■■■□ 25
KARS-204ENST00000564578 NFXL1Q6ZNB6 911 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 CATIPQ7Z7H3 387 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 ADAMTS5Q9UNA0 930 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 SLC12A7Q9Y666 1083 aa14.58□□□□□ -0.08
KARS-204ENST00000564578 PALM3A6NDB9 673 aaPredicted RBP14.57□□□□□ -0.08
KARS-204ENST00000564578 TLR2O60603 784 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 PEX10O60683 326 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 IRX3P78415 501 aaPredicted RBP14.57□□□□□ -0.08
KARS-204ENST00000564578 FGD1P98174 961 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 RAB11FIP4Q86YS3 637 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 CPVLQ9H3G5 476 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 GPCPD1Q9NPB8 672 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 PNMA3Q9UL41 463 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 HPS5Q9UPZ3 1129 aa14.57□□□□□ -0.08
KARS-204ENST00000564578 KLF18A0A0U1RQI7 1052 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 PLA2G6O60733 806 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 DDAH1O94760 285 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 OSBPP22059 807 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 DSG3P32926 999 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 SLC16A2P36021 539 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 STAT2P52630 851 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 AK2P54819 239 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 GRM4Q14833 912 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 CCDC96Q2M329 555 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 SLC35G1Q2M3R5 365 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 GPATCH4Q5T3I0 446 aaKnown RBP14.56□□□□□ -0.08
KARS-204ENST00000564578 BTNL9Q6UXG8 535 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 LBX2Q6XYB7 198 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 NUP133Q8WUM0 1156 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 PARK7Q99497 189 aaKnown RBP14.56□□□□□ -0.08
KARS-204ENST00000564578 MAP3K14Q99558 947 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 SAGE1Q9NXZ1 904 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 RBPJLQ9UBG7 517 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 FEM1BQ9UK73 627 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 PPP1R9AQ9ULJ8 1098 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 PARP1P09874 1014 aaKnown RBP14.56□□□□□ -0.08
KARS-204ENST00000564578 C17orf99Q6UX52 265 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 MICU3Q86XE3 530 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 PRPF38AQ8NAV1 312 aaKnown RBP14.56□□□□□ -0.08
KARS-204ENST00000564578 FANCBQ8NB91 859 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 SMCR8Q8TEV9 937 aaPredicted RBP14.56□□□□□ -0.08
KARS-204ENST00000564578 ATG4CQ96DT6 458 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 SLF1Q9BQI6 1058 aa14.56□□□□□ -0.08
KARS-204ENST00000564578 UBA5Q9GZZ9 404 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms