RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 P2RX7Q99572 595 aaKnown RBP19.59■□□□□ 0.73
RNF40-206ENST00000564260 KAT14Q9H8E8 782 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 ADAMTS5Q9UNA0 930 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 SPDYE16A6NNV3 312 aaPredicted RBP19.58■□□□□ 0.72
RNF40-206ENST00000564260 FLOT1O75955 427 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 SNHG28P0DPA3 235 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 PSMA5P28066 241 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 DSG3P32926 999 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 PRMT2P55345 433 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 ANAPC15P60006 121 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 CCNA1P78396 465 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 SEC23AQ15436 765 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 PKN2Q16513 984 aaKnown RBP19.58■□□□□ 0.72
RNF40-206ENST00000564260 KIAA1755Q5JYT7 1200 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 IFIT1BQ5T764 474 aaKnown RBP19.58■□□□□ 0.72
RNF40-206ENST00000564260 R3HDMLQ9H3Y0 253 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 PPP1R9AQ9ULJ8 1098 aa19.58■□□□□ 0.72
RNF40-206ENST00000564260 COPB2P35606 906 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 LIFRP42702 1097 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 STAT2P52630 851 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 LACTBP83111 547 aaPredicted RBP19.57■□□□□ 0.72
RNF40-206ENST00000564260 FAM83BQ5T0W9 1011 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 PNMA1Q8ND90 353 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 GPRC5AQ8NFJ5 357 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 MAP3K14Q99558 947 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 SLF1Q9BQI6 1058 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 PNMA2Q9UL42 364 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 TAF6LQ9Y6J9 622 aa19.57■□□□□ 0.72
RNF40-206ENST00000564260 IFIT3O14879 490 aaKnown RBP19.56■□□□□ 0.72
RNF40-206ENST00000564260 WTAPQ15007 396 aa19.56■□□□□ 0.72
RNF40-206ENST00000564260 CYB5R4Q7L1T6 521 aa19.56■□□□□ 0.72
RNF40-206ENST00000564260 DHX32Q7L7V1 743 aaKnown RBP19.56■□□□□ 0.72
RNF40-206ENST00000564260 FBXL16Q8N461 479 aa19.56■□□□□ 0.72
RNF40-206ENST00000564260 CPA4Q9UI42 421 aa19.56■□□□□ 0.72
RNF40-206ENST00000564260 TSKSQ9UJT2 592 aa19.56■□□□□ 0.72
RNF40-206ENST00000564260 MYH4Q9Y623 1939 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 ATP2A1O14983 1001 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 RAD21O60216 631 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 PDHBP11177 359 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 HOXD10P28358 340 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 OAZ1P54368 228 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 ERVK-9P63128 1117 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 ERVK-24P63145 666 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 ASPRV1Q53RT3 343 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 BTNL9Q6UXG8 535 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 CTU1Q7Z7A3 348 aaKnown RBP19.55■□□□□ 0.72
RNF40-206ENST00000564260 RASEFQ8IZ41 740 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 ANKRD13CQ8N6S4 541 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 IGDCC4Q8TDY8 1250 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 IL17RAQ96F46 866 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 ZKSCAN3Q9BRR0 538 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 RBPJLQ9UBG7 517 aa19.55■□□□□ 0.72
RNF40-206ENST00000564260 PRC1O43663 620 aa19.54■□□□□ 0.72
RNF40-206ENST00000564260 MAPK4P31152 587 aa19.54■□□□□ 0.72
RNF40-206ENST00000564260 FCGRTP55899 365 aa19.54■□□□□ 0.72
RNF40-206ENST00000564260 TMEM67Q5HYA8 995 aa19.54■□□□□ 0.72
RNF40-206ENST00000564260 SGMS1Q86VZ5 419 aa19.54■□□□□ 0.72
RNF40-206ENST00000564260 SHCBP1Q8NEM2 672 aa19.54■□□□□ 0.72
RNF40-206ENST00000564260 SNX14Q9Y5W7 946 aa19.54■□□□□ 0.72
RNF40-206ENST00000564260 VWA5AO00534 786 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 RCAN1P53805 252 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 ANTXR2P58335 489 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 EXOSC10Q01780 885 aaKnown RBP19.53■□□□□ 0.72
RNF40-206ENST00000564260 ZNF543Q08ER8 600 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 C8orf34Q49A92 452 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 IL27Q8NEV9 243 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 NKX2-3Q8TAU0 364 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 A0A0G2JMZ2 1700 aa19.53■□□□□ 0.72
RNF40-206ENST00000564260 TMEM232C9JQI7 657 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 ZBED4O75132 1171 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 DDAH1O94760 285 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 SLC25A27O95847 323 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 CALM1P0DP23 149 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 CALM2P0DP24 149 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 CALM3P0DP25 149 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 BLOC1S2Q6QNY1 142 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 EFCC1Q9HA90 598 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 LY9Q9HBG7 655 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 SLC38A10Q9HBR0 1119 aa19.52■□□□□ 0.72
RNF40-206ENST00000564260 SH2B2O14492 632 aaPredicted RBP19.51■□□□□ 0.71
RNF40-206ENST00000564260 CCDC96Q2M329 555 aa19.51■□□□□ 0.71
RNF40-206ENST00000564260 COA7Q96BR5 231 aa19.51■□□□□ 0.71
RNF40-206ENST00000564260 ATG4CQ96DT6 458 aa19.51■□□□□ 0.71
RNF40-206ENST00000564260 NUP88Q99567 741 aaPredicted RBP19.51■□□□□ 0.71
RNF40-206ENST00000564260 SPATC1LQ9H0A9 340 aa19.51■□□□□ 0.71
RNF40-206ENST00000564260 MROH8Q9H579 483 aa19.51■□□□□ 0.71
RNF40-206ENST00000564260 TXNRD2Q9NNW7 524 aa19.51■□□□□ 0.71
RNF40-206ENST00000564260 CNMDO75829 334 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 PARP1P09874 1014 aaKnown RBP19.5■□□□□ 0.71
RNF40-206ENST00000564260 PSMC4P43686 418 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 TROAPQ12815 778 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 ADCK5Q3MIX3 580 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 CCAR1Q8IX12 1150 aaKnown RBP19.5■□□□□ 0.71
RNF40-206ENST00000564260 REPS2Q8NFH8 660 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 CD99L2Q8TCZ2 262 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 SOCS4Q8WXH5 440 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 JAKMIP1Q96N16 626 aaKnown RBP19.5■□□□□ 0.71
RNF40-206ENST00000564260 TEX13BQ9BXU2 312 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms