RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 SYNPO2Q9UMS6 1093 aa20.03■□□□□ 0.8
CCNF-203ENST00000564236 SALL3Q9BXA9 1300 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 MYH8P13535 1937 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 CYP2C19P33261 490 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 RIOX2Q8IUF8 465 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 C7orf61Q8IZ16 206 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 REPS2Q8NFH8 660 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 SLC5A4Q9NY91 659 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 STAP2Q9UGK3 403 aa20.02■□□□□ 0.8
CCNF-203ENST00000564236 PARP14Q460N5 1801 aa20.02■□□□□ 0.79
CCNF-203ENST00000564236 PLIN4Q96Q06 1357 aa20.01■□□□□ 0.79
CCNF-203ENST00000564236 PATL2C9JE40 543 aaKnown RBP20.01■□□□□ 0.79
CCNF-203ENST00000564236 DNM1LO00429 736 aa20.01■□□□□ 0.79
CCNF-203ENST00000564236 VWA5AO00534 786 aa20.01■□□□□ 0.79
CCNF-203ENST00000564236 COPB2P35606 906 aa20.01■□□□□ 0.79
CCNF-203ENST00000564236 RRP1P56182 461 aaKnown RBP20.01■□□□□ 0.79
CCNF-203ENST00000564236 MKL1Q969V6 931 aa20.01■□□□□ 0.79
CCNF-203ENST00000564236 ZNF287Q9HBT7 754 aa20.01■□□□□ 0.79
CCNF-203ENST00000564236 ZNF214Q9UL59 606 aaPredicted RBP20.01■□□□□ 0.79
CCNF-203ENST00000564236 M0R2C6 588 aa20■□□□□ 0.79
CCNF-203ENST00000564236 FCER1AP12319 257 aa20■□□□□ 0.79
CCNF-203ENST00000564236 NCAPG2Q86XI2 1143 aa20■□□□□ 0.79
CCNF-203ENST00000564236 MKNK2Q9HBH9 465 aa20■□□□□ 0.79
CCNF-203ENST00000564236 FBXO28Q9NVF7 368 aa20■□□□□ 0.79
CCNF-203ENST00000564236 NRBP1Q9UHY1 535 aa20■□□□□ 0.79
CCNF-203ENST00000564236 DIS3Q9Y2L1 958 aaKnown RBP20■□□□□ 0.79
CCNF-203ENST00000564236 SEPT4O43236 478 aa19.99■□□□□ 0.79
CCNF-203ENST00000564236 LRRC26Q2I0M4 334 aa19.99■□□□□ 0.79
CCNF-203ENST00000564236 ZMYM1Q5SVZ6 1142 aa19.99■□□□□ 0.79
CCNF-203ENST00000564236 IFNL3Q8IZI9 196 aa19.99■□□□□ 0.79
CCNF-203ENST00000564236 MAML3Q96JK9 1138 aa19.99■□□□□ 0.79
CCNF-203ENST00000564236 FRMPD3Q5JV73 1810 aa19.99■□□□□ 0.79
CCNF-203ENST00000564236 MINDY4BA8MYZ0 360 aa19.98■□□□□ 0.79
CCNF-203ENST00000564236 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
CCNF-203ENST00000564236 MX1P20591 662 aa19.98■□□□□ 0.79
CCNF-203ENST00000564236 TDO2P48775 406 aa19.98■□□□□ 0.79
CCNF-203ENST00000564236 PLS1Q14651 629 aa19.98■□□□□ 0.79
CCNF-203ENST00000564236 FAM83BQ5T0W9 1011 aa19.98■□□□□ 0.79
CCNF-203ENST00000564236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.98■□□□□ 0.79
CCNF-203ENST00000564236 OTUD7AQ8TE49 926 aaPredicted RBP19.98■□□□□ 0.79
CCNF-203ENST00000564236 ZMYND8Q9ULU4 1186 aaPredicted RBP19.98■□□□□ 0.79
CCNF-203ENST00000564236 F5H6K3 240 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 NDUFB10O96000 172 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 STAT3P40763 770 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 KLRC3Q07444 240 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 TICAM2Q86XR7 235 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 SLF1Q9BQI6 1058 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 NACAP1Q9BZK3 213 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 MTMR4Q9NYA4 1195 aa19.97■□□□□ 0.79
CCNF-203ENST00000564236 CNGA1P29973 690 aa19.96■□□□□ 0.79
CCNF-203ENST00000564236 MAGEA10P43363 369 aaPredicted RBP19.96■□□□□ 0.79
CCNF-203ENST00000564236 HDAC1Q13547 482 aaPredicted RBP19.96■□□□□ 0.79
CCNF-203ENST00000564236 ZNF792Q3KQV3 632 aa19.96■□□□□ 0.79
CCNF-203ENST00000564236 GPR153Q6NV75 609 aa19.96■□□□□ 0.79
CCNF-203ENST00000564236 PRPF38AQ8NAV1 312 aaKnown RBP19.96■□□□□ 0.79
CCNF-203ENST00000564236 ARRDC4Q8NCT1 418 aa19.96■□□□□ 0.79
CCNF-203ENST00000564236 GMCL1P1Q8NEA9 526 aa19.96■□□□□ 0.79
CCNF-203ENST00000564236 SEC62Q99442 399 aaKnown RBP19.96■□□□□ 0.79
CCNF-203ENST00000564236 MMP19Q99542 508 aa19.96■□□□□ 0.79
CCNF-203ENST00000564236 LRIT3Q3SXY7 679 aa19.95■□□□□ 0.78
CCNF-203ENST00000564236 ZNF444Q8N0Y2 327 aaPredicted RBP19.95■□□□□ 0.78
CCNF-203ENST00000564236 MSL3Q8N5Y2 521 aaKnown RBP19.95■□□□□ 0.78
CCNF-203ENST00000564236 NEDD1Q8NHV4 660 aa19.95■□□□□ 0.78
CCNF-203ENST00000564236 CEP95Q96GE4 821 aa19.95■□□□□ 0.78
CCNF-203ENST00000564236 FSD1Q9BTV5 496 aa19.95■□□□□ 0.78
CCNF-203ENST00000564236 TEX13BQ9BXU2 312 aa19.95■□□□□ 0.78
CCNF-203ENST00000564236 SOX1O00570 391 aaPredicted RBP19.94■□□□□ 0.78
CCNF-203ENST00000564236 FOXP2O15409 715 aa19.94■□□□□ 0.78
CCNF-203ENST00000564236 TTLL1O95922 423 aa19.94■□□□□ 0.78
CCNF-203ENST00000564236 APPP05067 770 aa19.94■□□□□ 0.78
CCNF-203ENST00000564236 SYN1P17600 705 aa19.94■□□□□ 0.78
CCNF-203ENST00000564236 AAMPQ13685 434 aa19.94■□□□□ 0.78
CCNF-203ENST00000564236 KCTD2Q14681 263 aa19.94■□□□□ 0.78
CCNF-203ENST00000564236 SENP6Q9GZR1 1112 aaPredicted RBP19.94■□□□□ 0.78
CCNF-203ENST00000564236 CLIP2Q9UDT6 1046 aa19.94■□□□□ 0.78
CCNF-203ENST00000564236 DNAJC25-GNG10A0A024R161 153 aa19.93■□□□□ 0.78
CCNF-203ENST00000564236 PDE4BQ07343 736 aa19.93■□□□□ 0.78
CCNF-203ENST00000564236 SNX17Q15036 470 aa19.93■□□□□ 0.78
CCNF-203ENST00000564236 C1orf53Q5VUE5 145 aa19.93■□□□□ 0.78
CCNF-203ENST00000564236 TDHQ8IZJ6 230 aa19.93■□□□□ 0.78
CCNF-203ENST00000564236 NUP88Q99567 741 aaPredicted RBP19.93■□□□□ 0.78
CCNF-203ENST00000564236 TINF2Q9BSI4 451 aa19.93■□□□□ 0.78
CCNF-203ENST00000564236 PRDM1O75626 825 aa19.92■□□□□ 0.78
CCNF-203ENST00000564236 SLC3A2P08195 630 aaKnown RBP19.92■□□□□ 0.78
CCNF-203ENST00000564236 OAZ1P54368 228 aa19.92■□□□□ 0.78
CCNF-203ENST00000564236 PPARAQ07869 468 aa19.92■□□□□ 0.78
CCNF-203ENST00000564236 NAPBQ9H115 298 aa19.92■□□□□ 0.78
CCNF-203ENST00000564236 SLC38A10Q9HBR0 1119 aa19.92■□□□□ 0.78
CCNF-203ENST00000564236 FEM1BQ9UK73 627 aa19.92■□□□□ 0.78
CCNF-203ENST00000564236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCNF-203ENST00000564236 COL11A1P12107 1806 aaPredicted RBP19.91■□□□□ 0.78
CCNF-203ENST00000564236 PGK2P07205 417 aa19.91■□□□□ 0.78
CCNF-203ENST00000564236 FDX1P10109 184 aa19.91■□□□□ 0.78
CCNF-203ENST00000564236 NOVP48745 357 aa19.91■□□□□ 0.78
CCNF-203ENST00000564236 PPP4R3BQ5MIZ7 849 aa19.91■□□□□ 0.78
CCNF-203ENST00000564236 PRAMEF19Q5SWL8 479 aa19.91■□□□□ 0.78
CCNF-203ENST00000564236 SAMD1Q6SPF0 538 aaPredicted RBP19.91■□□□□ 0.78
CCNF-203ENST00000564236 MAMDC4Q6UXC1 1216 aa19.91■□□□□ 0.78
CCNF-203ENST00000564236 ZNF467Q7Z7K2 595 aaPredicted RBP19.91■□□□□ 0.78
CCNF-203ENST00000564236 STK11IPQ8N1F8 1099 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms