RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 TOP1P11387 765 aaKnown RBP10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 ERVK-9P63128 1117 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 ERVK-24P63145 666 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 COL9A3Q14050 684 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 SEC23AQ15436 765 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 PKN2Q16513 984 aaKnown RBP10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 Q3C1V9 767 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 TSGA10IPQ3SY00 556 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 SLFN13Q68D06 897 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 CYB5R4Q7L1T6 521 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 RASGRP2Q7LDG7 609 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 ENAHQ8N8S7 591 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 REPS2Q8NFH8 660 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 ATG4CQ96DT6 458 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 TANGO6Q9C0B7 1094 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 MCOLN1Q9GZU1 580 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 HOXC10Q9NYD6 342 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 BTBD7Q9P203 1132 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 PPP1R9AQ9ULJ8 1098 aa10.39□□□□□ -0.75
NSMCE1-206ENST00000563900 TNKSO95271 1327 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 PLA2G6O60733 806 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 FLOT1O75955 427 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 GNRH1P01148 92 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 PDHBP11177 359 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 BMP3P12645 472 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 PSMC4P43686 418 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 ANTXR2P58335 489 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 CCDC178Q5BJE1 867 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 FBXO46Q6PJ61 603 aaPredicted RBP10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 IQCA1Q86XH1 822 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 MB21D1Q8N884 522 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 GPRC5AQ8NFJ5 357 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 ZSCAN10Q96SZ4 725 aaPredicted RBP10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 ZKSCAN3Q9BRR0 538 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 EFCC1Q9HA90 598 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 TRIM17Q9Y577 477 aa10.38□□□□□ -0.75
NSMCE1-206ENST00000563900 PLXNB2O15031 1838 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 VWA5AO00534 786 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 HSPA4P34932 840 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 SLC1A4P43007 532 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 PRMT2P55345 433 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 FCGRTP55899 365 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 TRDNQ13061 729 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 DCAF4Q8WV16 495 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 SLF1Q9BQI6 1058 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 MTA3Q9BTC8 594 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 PORCNQ9H237 461 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 SRRDQ9UH36 339 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 FEM1BQ9UK73 627 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 ZNF214Q9UL59 606 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 PTPN22Q9Y2R2 807 aa10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 COL11A1P12107 1806 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-206ENST00000563900 ZNF236Q9UL36 1845 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 ATP2A1O14983 1001 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 REC8O95072 547 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 MCCP23508 829 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 ZNF543Q08ER8 600 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 IRF5Q13568 498 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 KIF22Q14807 665 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 TMEM132BQ14DG7 1078 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 ARHGEF6Q15052 776 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 BTNL9Q6UXG8 535 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 RALYLQ86SE5 291 aaKnown RBP10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 TNS4Q8IZW8 715 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 PRPF38AQ8NAV1 312 aaKnown RBP10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 PNMA1Q8ND90 353 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 SHCBP1Q8NEM2 672 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 IGDCC4Q8TDY8 1250 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 UBAC1Q9BSL1 405 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 SPATC1LQ9H0A9 340 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 SLC38A10Q9HBR0 1119 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 GJD2Q9UKL4 321 aa10.36□□□□□ -0.75
NSMCE1-206ENST00000563900 CENPFP49454 3210 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 TMEM232C9JQI7 657 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 TNPO2O14787 897 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 RAD21O60216 631 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 MAPK4P31152 587 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 STAT2P52630 851 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 CCNA1P78396 465 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 PRKCZQ05513 592 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 RNF20Q5VTR2 975 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 KCTD1Q719H9 257 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 FAM160B2Q86V87 743 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 USP6NLQ92738 828 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 MOV10L1Q9BXT6 1211 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 USP26Q9BXU7 913 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 GABRQQ9UN88 632 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 HPS5Q9UPZ3 1129 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 PTCH2Q9Y6C5 1203 aa10.35□□□□□ -0.75
NSMCE1-206ENST00000563900 ZNF536O15090 1300 aa10.34□□□□□ -0.75
NSMCE1-206ENST00000563900 WDR19Q8NEZ3 1342 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms