RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 GPCPD1Q9NPB8 672 aa25.37■■□□□ 1.65
LINC01960-201ENST00000563759 CYTH3O43739 400 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 CTNND1O60716 968 aaKnown RBP25.36■■□□□ 1.65
LINC01960-201ENST00000563759 DNM1Q05193 864 aaKnown RBP25.36■■□□□ 1.65
LINC01960-201ENST00000563759 PFKFB3Q16875 520 aaPredicted RBP25.36■■□□□ 1.65
LINC01960-201ENST00000563759 FAM173BQ6P4H8 233 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 F5H6K3 240 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 SMARCA1P28370 1054 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 ECE1P42892 770 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 KLRC3Q07444 240 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 SH2D4AQ9H788 454 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 VPS54Q9P1Q0 977 aa25.36■■□□□ 1.65
LINC01960-201ENST00000563759 A0A1W2PRG0 241 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 KIF23Q02241 960 aaPredicted RBP25.35■■□□□ 1.65
LINC01960-201ENST00000563759 SAFBQ15424 915 aaKnown RBP eCLIP25.35■■□□□ 1.65
LINC01960-201ENST00000563759 SLC35G1Q2M3R5 365 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 EAPPQ56P03 285 aaPredicted RBP25.35■■□□□ 1.65
LINC01960-201ENST00000563759 KCTD1Q719H9 257 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 KRT26Q7Z3Y9 468 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 WRNIP1Q96S55 665 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 UBA5Q9GZZ9 404 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 GINM1Q9NU53 330 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 SEC63Q9UGP8 760 aaKnown RBP25.35■■□□□ 1.65
LINC01960-201ENST00000563759 KCNJ14Q9UNX9 436 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 CNPY2Q9Y2B0 182 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 OTOFQ9HC10 1997 aa25.35■■□□□ 1.65
LINC01960-201ENST00000563759 ADM5C9JUS6 153 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 NDUFB10O96000 172 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 MMP1P03956 469 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 PTMSP20962 102 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 HOMER1Q86YM7 354 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 ACER1Q8TDN7 264 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 ZC3H15Q8WU90 426 aaKnown RBP25.34■■□□□ 1.65
LINC01960-201ENST00000563759 RRP36Q96EU6 259 aaKnown RBP25.34■■□□□ 1.65
LINC01960-201ENST00000563759 TAF1DQ9H5J8 278 aaPredicted RBP25.34■■□□□ 1.65
LINC01960-201ENST00000563759 GOPCQ9HD26 462 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 TMX2Q9Y320 296 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 KRT85P78386 507 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 USP48Q86UV5 1035 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 GMCL1Q96IK5 515 aa25.34■■□□□ 1.65
LINC01960-201ENST00000563759 FIBPO43427 364 aa25.33■■□□□ 1.65
LINC01960-201ENST00000563759 INPP5BP32019 993 aa25.33■■□□□ 1.65
LINC01960-201ENST00000563759 BRAPQ7Z569 592 aa25.33■■□□□ 1.65
LINC01960-201ENST00000563759 VAT1LQ9HCJ6 419 aa25.33■■□□□ 1.65
LINC01960-201ENST00000563759 CCDC84Q86UT8 332 aaPredicted RBP25.32■■□□□ 1.64
LINC01960-201ENST00000563759 FEZ1Q99689 392 aa25.32■■□□□ 1.64
LINC01960-201ENST00000563759 GDPD2Q9HCC8 539 aa25.32■■□□□ 1.64
LINC01960-201ENST00000563759 FZD1Q9UP38 647 aa25.32■■□□□ 1.64
LINC01960-201ENST00000563759 PHIPQ8WWQ0 1821 aa25.32■■□□□ 1.64
LINC01960-201ENST00000563759 KIF28PB7ZC32 967 aa25.32■■□□□ 1.64
LINC01960-201ENST00000563759 PNMA8AQ86V59 439 aaPredicted RBP25.32■■□□□ 1.64
LINC01960-201ENST00000563759 SPICE1Q8N0Z3 855 aa25.32■■□□□ 1.64
LINC01960-201ENST00000563759 GPKOWQ92917 476 aaPredicted RBP eCLIP25.32■■□□□ 1.64
LINC01960-201ENST00000563759 RIOX1Q9H6W3 641 aa25.32■■□□□ 1.64
LINC01960-201ENST00000563759 DCAF8L1A6NGE4 600 aa25.31■■□□□ 1.64
LINC01960-201ENST00000563759 ZYXQ15942 572 aaKnown RBP25.31■■□□□ 1.64
LINC01960-201ENST00000563759 TTBK2Q6IQ55 1244 aa25.31■■□□□ 1.64
LINC01960-201ENST00000563759 HEATR3Q7Z4Q2 680 aa25.31■■□□□ 1.64
LINC01960-201ENST00000563759 DIS3L2Q8IYB7 885 aaKnown RBP25.31■■□□□ 1.64
LINC01960-201ENST00000563759 SCYL3Q8IZE3 742 aa25.31■■□□□ 1.64
LINC01960-201ENST00000563759 PHF20Q9BVI0 1012 aa25.31■■□□□ 1.64
LINC01960-201ENST00000563759 ZNF112Q9UJU3 913 aa25.31■■□□□ 1.64
LINC01960-201ENST00000563759 PAPPA2Q9BXP8 1791 aa25.31■■□□□ 1.64
LINC01960-201ENST00000563759 PRPF40AO75400 957 aaKnown RBP25.3■■□□□ 1.64
LINC01960-201ENST00000563759 PIGSQ96S52 555 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 NUP88Q99567 741 aaPredicted RBP25.3■■□□□ 1.64
LINC01960-201ENST00000563759 PICK1Q9NRD5 415 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 POTECB2RU33 542 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 BMP3P12645 472 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 SLC16A2P36021 539 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 IKQ13123 557 aaPredicted RBP25.3■■□□□ 1.64
LINC01960-201ENST00000563759 PRKG1Q13976 671 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 ZKSCAN4Q969J2 545 aaPredicted RBP25.3■■□□□ 1.64
LINC01960-201ENST00000563759 SHISA4Q96DD7 197 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 GLIS2Q9BZE0 524 aaPredicted RBP25.3■■□□□ 1.64
LINC01960-201ENST00000563759 BRMS1Q9HCU9 246 aa25.3■■□□□ 1.64
LINC01960-201ENST00000563759 CSPP1Q1MSJ5 1256 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 WWC2Q6AWC2 1192 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 DLK2Q6UY11 383 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 ADGRF4Q8IZF3 695 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 CCDC148Q8NFR7 591 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 KLRG1Q96E93 195 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 VCPKMTQ9H867 229 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 SH3GLB2Q9NR46 395 aa25.29■■□□□ 1.64
LINC01960-201ENST00000563759 VEGFAP15692 232 aaPredicted RBP25.28■■□□□ 1.64
LINC01960-201ENST00000563759 U2AF2P26368 475 aaKnown RBP eCLIP25.28■■□□□ 1.64
LINC01960-201ENST00000563759 NLRP5P59047 1200 aa25.28■■□□□ 1.64
LINC01960-201ENST00000563759 ZNF396Q96N95 335 aaPredicted RBP25.28■■□□□ 1.64
LINC01960-201ENST00000563759 CFAP45Q9UL16 551 aa25.28■■□□□ 1.64
LINC01960-201ENST00000563759 BTBD18B2RXH4 712 aa25.28■■□□□ 1.64
LINC01960-201ENST00000563759 NF2P35240 595 aa25.28■■□□□ 1.64
LINC01960-201ENST00000563759 KRT2P35908 639 aa25.28■■□□□ 1.64
LINC01960-201ENST00000563759 FOXP1Q9H334 677 aaPredicted RBP25.28■■□□□ 1.64
LINC01960-201ENST00000563759 LMBRD1Q9NUN5 540 aa25.28■■□□□ 1.64
LINC01960-201ENST00000563759 BARHL2Q9NY43 387 aa25.28■■□□□ 1.64
LINC01960-201ENST00000563759 TFIP11Q9UBB9 837 aaKnown RBP25.28■■□□□ 1.64
LINC01960-201ENST00000563759 MYSM1Q5VVJ2 828 aa25.27■■□□□ 1.64
LINC01960-201ENST00000563759 NOSTRINQ8IVI9 506 aa25.27■■□□□ 1.64
LINC01960-201ENST00000563759 SCAND2PQ9GZW5 306 aaPredicted RBP25.27■■□□□ 1.64
LINC01960-201ENST00000563759 JMJD4Q9H9V9 463 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms