RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 FRMPD3Q5JV73 1810 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 ZNF236Q9UL36 1845 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 RASA1P20936 1047 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 TDO2P48775 406 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 CCNA1P78396 465 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 COG2Q14746 738 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 SMC5Q8IY18 1101 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 SPICE1Q8N0Z3 855 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 STK11IPQ8N1F8 1099 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 EXOC6Q8TAG9 804 aa20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 LBHD1Q9BQE6 289 aaPredicted RBP20.81■□□□□ 0.92
MAP1LC3B-204ENST00000563720 APPP05067 770 aa20.8■□□□□ 0.92
MAP1LC3B-204ENST00000563720 HOXC10Q9NYD6 342 aa20.8■□□□□ 0.92
MAP1LC3B-204ENST00000563720 FAM109BQ6ICB4 259 aaPredicted RBP20.79■□□□□ 0.92
MAP1LC3B-204ENST00000563720 EVI5LQ96CN4 794 aa20.79■□□□□ 0.92
MAP1LC3B-204ENST00000563720 LNPKQ9C0E8 428 aa20.79■□□□□ 0.92
MAP1LC3B-204ENST00000563720 SENP6Q9GZR1 1112 aaPredicted RBP20.79■□□□□ 0.92
MAP1LC3B-204ENST00000563720 RWDD1Q9H446 243 aaPredicted RBP20.79■□□□□ 0.92
MAP1LC3B-204ENST00000563720 MKNK2Q9HBH9 465 aa20.79■□□□□ 0.92
MAP1LC3B-204ENST00000563720 CUL9Q8IWT3 2517 aa20.79■□□□□ 0.92
MAP1LC3B-204ENST00000563720 POTEB2H3BUK9 544 aa20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 WDR46O15213 610 aaKnown RBP20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 IGHDP01880 384 aa20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 DSG3P32926 999 aa20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 ATP2B2Q01814 1243 aa20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 MAP2K5Q13163 448 aa20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 MFSD14CQ5VZR4 134 aa20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 FAM161BQ96MY7 647 aa20.78■□□□□ 0.92
MAP1LC3B-204ENST00000563720 FOXP2O15409 715 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 FLOT1O75955 427 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 WDR78Q5VTH9 848 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 CCDC129Q6ZRS4 1044 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 GUCD1Q96NT3 240 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 NACAP1Q9BZK3 213 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 PRKAG2Q9UGJ0 569 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 PLXNA1Q9UIW2 1896 aa20.77■□□□□ 0.92
MAP1LC3B-204ENST00000563720 IGKV6D-41A0A0C4DH26 115 aa20.76■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PRDM1O75626 825 aa20.76■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PTPREP23469 700 aa20.76■□□□□ 0.91
MAP1LC3B-204ENST00000563720 CNGA1P29973 690 aa20.76■□□□□ 0.91
MAP1LC3B-204ENST00000563720 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
MAP1LC3B-204ENST00000563720 MOV10L1Q9BXT6 1211 aaKnown RBP20.76■□□□□ 0.91
MAP1LC3B-204ENST00000563720 GOPCQ9HD26 462 aa20.76■□□□□ 0.91
MAP1LC3B-204ENST00000563720 SLC15A5A6NIM6 579 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 ATN1P54259 1190 aaPredicted RBP20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 GRB14Q14449 540 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 ZNF697Q5TEC3 545 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 ATG4CQ96DT6 458 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 SPATC1LQ9H0A9 340 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 NAPBQ9H115 298 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 ZNF287Q9HBT7 754 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 NYAP2Q9P242 653 aa20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3B-204ENST00000563720 MSCO60682 206 aa20.74■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PPARAQ07869 468 aa20.74■□□□□ 0.91
MAP1LC3B-204ENST00000563720 CHD1LQ86WJ1 897 aa20.74■□□□□ 0.91
MAP1LC3B-204ENST00000563720 ZNF444Q8N0Y2 327 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3B-204ENST00000563720 FLRT1Q9NZU1 646 aa20.74■□□□□ 0.91
MAP1LC3B-204ENST00000563720 DDX20Q9UHI6 824 aaKnown RBP20.74■□□□□ 0.91
MAP1LC3B-204ENST00000563720 ADAMTS5Q9UNA0 930 aa20.74■□□□□ 0.91
MAP1LC3B-204ENST00000563720 HOXC6P09630 235 aa20.73■□□□□ 0.91
MAP1LC3B-204ENST00000563720 NUCB1Q02818 461 aa20.73■□□□□ 0.91
MAP1LC3B-204ENST00000563720 FAM83BQ5T0W9 1011 aa20.73■□□□□ 0.91
MAP1LC3B-204ENST00000563720 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
MAP1LC3B-204ENST00000563720 HELLSQ9NRZ9 838 aa20.73■□□□□ 0.91
MAP1LC3B-204ENST00000563720 FBXO28Q9NVF7 368 aa20.73■□□□□ 0.91
MAP1LC3B-204ENST00000563720 IVNS1ABPQ9Y6Y0 642 aa20.73■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PLIN4Q96Q06 1357 aa20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 ERCC3P19447 782 aa20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PDE4BQ07343 736 aa20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 VPS53Q5VIR6 699 aa20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 SAMD1Q6SPF0 538 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 TICAM2Q86XR7 235 aa20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 CEP95Q96GE4 821 aa20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 FAM227BQ96M60 508 aa20.72■□□□□ 0.91
MAP1LC3B-204ENST00000563720 A0A0D9SFI3 127 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 F5H6K3 240 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 DNM1LO00429 736 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 RAD21O60216 631 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 SLC3A2P08195 630 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 RTP1P59025 263 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 KLRC3Q07444 240 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PLS1Q14651 629 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 TMEM132BQ14DG7 1078 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PLEKHM2Q8IWE5 1019 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 NEDD1Q8NHV4 660 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 NPLOC4Q8TAT6 608 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 MKL1Q969V6 931 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 MTMR4Q9NYA4 1195 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 CLIP2Q9UDT6 1046 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 PPP1R9AQ9ULJ8 1098 aa20.71■□□□□ 0.91
MAP1LC3B-204ENST00000563720 STRNO43815 780 aa20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 NDUFB10O96000 172 aa20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 IGHA2P01877 340 aa20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 CYP2C19P33261 490 aa20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 OSBPL3Q9H4L5 887 aa20.7■□□□□ 0.9
MAP1LC3B-204ENST00000563720 MROH8Q9H579 483 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms