RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 TRIB2Q92519 343 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 NUP88Q99567 741 aaPredicted RBP17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 MOV10L1Q9BXT6 1211 aaKnown RBP17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 GOPCQ9HD26 462 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 CLIP2Q9UDT6 1046 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 ZNF214Q9UL59 606 aaPredicted RBP17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 PPP1R9AQ9ULJ8 1098 aa17.58■□□□□ 0.4
RPUSD1-204ENST00000563560 ALPK3Q96L96 1907 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 HIP1O00291 1037 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 FLOT1O75955 427 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 INHAP05111 366 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 SLC3A2P08195 630 aaKnown RBP17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 CHMLP26374 656 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 TRIM32Q13049 653 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 GRB14Q14449 540 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 MB21D1Q8N884 522 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 SHCBP1Q8NEM2 672 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 STAG1Q8WVM7 1258 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 DSCC1Q9BVC3 393 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 SPATC1LQ9H0A9 340 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 TCP11L1Q9NUJ3 509 aa17.57■□□□□ 0.4
RPUSD1-204ENST00000563560 VWA5AO00534 786 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 HOXC6P09630 235 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 CCL5P13501 91 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 PTPREP23469 700 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 ATP2B2Q01814 1243 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 RASGRP2Q7LDG7 609 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 SOCS4Q8WXH5 440 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 UNC93B1Q9H1C4 597 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 DIAPH3Q9NSV4 1193 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 LCTP09848 1927 aa17.56■□□□□ 0.4
RPUSD1-204ENST00000563560 NEDD4P46934 1319 aa17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 RAD50Q92878 1312 aa17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 GJB1P08034 283 aa17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 MFAP1P55081 439 aaKnown RBP17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 HAND2P61296 217 aa17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 AKNAD1Q5T1N1 836 aa17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 FLRT1Q9NZU1 646 aa17.55■□□□□ 0.4
RPUSD1-204ENST00000563560 DNAH12Q6ZR08 3092 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 SLC15A5A6NIM6 579 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 HMGCRP04035 888 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 PCP11498 1178 aaKnown RBP17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 GJA8P48165 433 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 CCNA1P78396 465 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 CCL14Q16627 93 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 GMCL1Q96IK5 515 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 CRISPLD2Q9H0B8 497 aa17.54■□□□□ 0.4
RPUSD1-204ENST00000563560 ATP2A1O14983 1001 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 MYCP01106 439 aaPredicted RBP17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 ERCC3P19447 782 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 CYP2B6P20813 491 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 MAP2K5Q13163 448 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 RIOX2Q8IUF8 465 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 NPLOC4Q8TAT6 608 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 APBA2Q99767 749 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 SLF1Q9BQI6 1058 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 TMEM106CQ9BVX2 250 aa17.53■□□□□ 0.4
RPUSD1-204ENST00000563560 TSPY2A6NKD2 308 aa17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 SGSM2O43147 1006 aa17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 RANBP6O60518 1105 aaKnown RBP17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 PLA2G6O60733 806 aa17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 COBLO75128 1261 aa17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 UBXN2AP68543 259 aa17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 PTH1RQ03431 593 aa17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 SLFN13Q68D06 897 aa17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.52■□□□□ 0.4
RPUSD1-204ENST00000563560 RGS2P41220 211 aa17.51■□□□□ 0.39
RPUSD1-204ENST00000563560 MNX1P50219 401 aaPredicted RBP17.51■□□□□ 0.39
RPUSD1-204ENST00000563560 ABRAQ8N0Z2 381 aa17.51■□□□□ 0.39
RPUSD1-204ENST00000563560 RNF208Q9H0X6 261 aa17.51■□□□□ 0.39
RPUSD1-204ENST00000563560 MROH8Q9H579 483 aa17.51■□□□□ 0.39
RPUSD1-204ENST00000563560 SLC38A10Q9HBR0 1119 aa17.51■□□□□ 0.39
RPUSD1-204ENST00000563560 RIPK3Q9Y572 518 aa17.51■□□□□ 0.39
RPUSD1-204ENST00000563560 ZNF536O15090 1300 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 MCM3APO60318 1980 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 STRNO43815 780 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 SGPL1O95470 568 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 BMP3P12645 472 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 CACNB2Q08289 660 aaPredicted RBP17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 MFSD6Q6ZSS7 791 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 ANKS1AQ92625 1134 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 FEM1BQ9UK73 627 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 TAF6LQ9Y6J9 622 aa17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 RANBP2P49792 3224 aaKnown RBP17.5■□□□□ 0.39
RPUSD1-204ENST00000563560 CEP290O15078 2479 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 RPTORQ8N122 1335 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms