RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 PARP4Q9UKK3 1724 aaKnown RBP6.97□□□□□ -1.29
CNOT1-205ENST00000563283 CCDC9Q9Y3X0 531 aaKnown RBP6.97□□□□□ -1.29
CNOT1-205ENST00000563283 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 ZNF157P51786 506 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-205ENST00000563283 MAP7Q14244 749 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT1-205ENST00000563283 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 TCP11L2Q8N4U5 519 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 FBXL6Q8N531 539 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 ANKRD24Q8TF21 1146 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 CCDC86Q9H6F5 360 aaKnown RBP6.96□□□□□ -1.3
CNOT1-205ENST00000563283 KRT82Q9NSB4 513 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 POLKQ9UBT6 870 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 GPN3Q9UHW5 284 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-205ENST00000563283 LRRC37A3O60309 1634 aa6.96□□□□□ -1.3
CNOT1-205ENST00000563283 GSTP1P09211 210 aaKnown RBP6.95□□□□□ -1.3
CNOT1-205ENST00000563283 RAB6AP20340 208 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 PPP2R3AQ06190 1150 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 NBPF6Q5VWK0 638 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 NXPE4Q6UWF7 544 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 PTF1AQ7RTS3 328 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 KRT27Q7Z3Y8 459 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 ZAR1Q86SH2 424 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 SHISA5Q8N114 240 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 GATA6Q92908 595 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 NBPF4Q96M43 638 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 METTL22Q9BUU2 404 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-205ENST00000563283 OSBPL1AQ9BXW6 950 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 KRTAP9-9Q9BYP9 154 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 KRTAP9-4Q9BYQ2 154 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 SEMA6CQ9H3T2 930 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 TMEM39AQ9NV64 488 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 SHANK3Q9BYB0 1731 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 CGNL1Q0VF96 1302 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 SRCAPQ6ZRS2 3230 aa6.95□□□□□ -1.3
CNOT1-205ENST00000563283 SBF2Q86WG5 1849 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 BLMP54132 1417 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 PATL2C9JE40 543 aaKnown RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 TMPRSS2O15393 492 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 NFICP08651 508 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 LIG1P18858 919 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 HOXA10P31260 410 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 ADMP35318 185 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 TNNT2P45379 298 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 ASPAP45381 313 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 MAPK8P45983 427 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 HNRNPUQ00839 825 aaKnown RBP eCLIP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 DDX10Q13206 875 aaKnown RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 KIF4BQ2VIQ3 1234 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 TOM1L2Q6ZVM7 507 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 PDZD3Q86UT5 571 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 MARCH10Q8NA82 808 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 C3orf58Q8NDZ4 430 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 LTV1Q96GA3 475 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 TBC1D32Q96NH3 1257 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 PPP1R9AQ9ULJ8 1098 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 LEMD3Q9Y2U8 911 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 THRAP3Q9Y2W1 955 aaKnown RBP6.94□□□□□ -1.3
CNOT1-205ENST00000563283 INSRP06213 1382 aa6.94□□□□□ -1.3
CNOT1-205ENST00000563283 TNS1Q9HBL0 1735 aaKnown RBP6.93□□□□□ -1.3
CNOT1-205ENST00000563283 ZNF862O60290 1169 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 FOSL1P15407 271 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 SEZ6L2Q6UXD5 910 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-205ENST00000563283 ZC3H12CQ9C0D7 883 aaKnown RBP6.93□□□□□ -1.3
CNOT1-205ENST00000563283 SRCIN1Q9C0H9 1055 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 CRIM1Q9NZV1 1036 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 AKAP2Q9Y2D5 859 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 PCDHGC5Q9Y5F6 944 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 NCAPD2Q15021 1401 aa6.93□□□□□ -1.3
CNOT1-205ENST00000563283 SMG6Q86US8 1419 aaKnown RBP6.93□□□□□ -1.3
CNOT1-205ENST00000563283 ADAMTS4O75173 837 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 AMPHP49418 695 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 ID3Q02535 119 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 ALG1LQ6GMV1 187 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 SULF2Q8IWU5 870 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 USHBP1Q8N6Y0 703 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 RTL1A6NKG5 1358 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 KIF24Q5T7B8 1368 aa6.92□□□□□ -1.3
CNOT1-205ENST00000563283 MEGF6O75095 1541 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 RGPD1P0DJD0 1748 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 FAM170BA6NMN3 283 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 GIPC1O14908 333 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 SLFN14P0C7P3 912 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 GSTT1P30711 240 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 GP2P55259 537 aaKnown RBP6.91□□□□□ -1.3
CNOT1-205ENST00000563283 CNGB1Q14028 1251 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-205ENST00000563283 EIF4A2Q14240 407 aaKnown RBP6.91□□□□□ -1.3
CNOT1-205ENST00000563283 CC2D1BQ5T0F9 858 aaKnown RBP6.91□□□□□ -1.3
CNOT1-205ENST00000563283 DEFB132Q7Z7B7 95 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 STK35Q8TDR2 534 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 FANCD2OSQ96PS1 177 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 SETDB2Q96T68 719 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 ATXN3LQ9H3M9 355 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 C1GALT1Q9NS00 363 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 PPM1HQ9ULR3 514 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 KNSTRNQ9Y448 316 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 NSD2O96028 1365 aa6.91□□□□□ -1.3
CNOT1-205ENST00000563283 FLT4P35916 1363 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms