RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PTPN18Q99952 460 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 GPHNQ9NQX3 736 aaPredicted RBP22.01■■□□□ 1.11
RAB40C-207ENST00000563109 SLC12A7Q9Y666 1083 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 DDAH1O94760 285 aa22■■□□□ 1.11
RAB40C-207ENST00000563109 MAP2K1Q02750 393 aaPredicted RBP22■■□□□ 1.11
RAB40C-207ENST00000563109 RABEP1Q15276 862 aa22■■□□□ 1.11
RAB40C-207ENST00000563109 SGMS1Q86VZ5 419 aa22■■□□□ 1.11
RAB40C-207ENST00000563109 ZNF654Q8IZM8 581 aa22■■□□□ 1.11
RAB40C-207ENST00000563109 FBXL16Q8N461 479 aa22■■□□□ 1.11
RAB40C-207ENST00000563109 CHMP4CQ96CF2 233 aa22■■□□□ 1.11
RAB40C-207ENST00000563109 PARK7Q99497 189 aaKnown RBP22■■□□□ 1.11
RAB40C-207ENST00000563109 NUP88Q99567 741 aaPredicted RBP22■■□□□ 1.11
RAB40C-207ENST00000563109 SENP2Q9HC62 589 aa22■■□□□ 1.11
RAB40C-207ENST00000563109 PARP14Q460N5 1801 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 CALM1P0DP23 149 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 CALM2P0DP24 149 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 CALM3P0DP25 149 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 PDHBP11177 359 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 HOXA7P31268 230 aaPredicted RBP21.99■■□□□ 1.11
RAB40C-207ENST00000563109 NEK4P51957 841 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 ANKRD1Q15327 319 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 BRF1Q92994 677 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 BEGAINQ9BUH8 593 aa21.99■■□□□ 1.11
RAB40C-207ENST00000563109 NAP1L2Q9ULW6 460 aaPredicted RBP21.99■■□□□ 1.11
RAB40C-207ENST00000563109 KLF18A0A0U1RQI7 1052 aa21.98■■□□□ 1.11
RAB40C-207ENST00000563109 FLOT1O75955 427 aa21.98■■□□□ 1.11
RAB40C-207ENST00000563109 PARP1P09874 1014 aaKnown RBP21.98■■□□□ 1.11
RAB40C-207ENST00000563109 IKQ13123 557 aaPredicted RBP21.98■■□□□ 1.11
RAB40C-207ENST00000563109 TAF1CQ15572 869 aaPredicted RBP21.98■■□□□ 1.11
RAB40C-207ENST00000563109 ASPRV1Q53RT3 343 aa21.98■■□□□ 1.11
RAB40C-207ENST00000563109 GPATCH4Q5T3I0 446 aaKnown RBP21.98■■□□□ 1.11
RAB40C-207ENST00000563109 CATSPERGQ6ZRH7 1159 aa21.98■■□□□ 1.11
RAB40C-207ENST00000563109 NUP133Q8WUM0 1156 aa21.98■■□□□ 1.11
RAB40C-207ENST00000563109 AGXT2Q9BYV1 514 aa21.98■■□□□ 1.11
RAB40C-207ENST00000563109 SNHG28P0DPA3 235 aa21.97■■□□□ 1.11
RAB40C-207ENST00000563109 STAT2P52630 851 aa21.97■■□□□ 1.11
RAB40C-207ENST00000563109 ZNF543Q08ER8 600 aa21.97■■□□□ 1.11
RAB40C-207ENST00000563109 APOA5Q6Q788 366 aa21.97■■□□□ 1.11
RAB40C-207ENST00000563109 IL27Q8NEV9 243 aa21.97■■□□□ 1.11
RAB40C-207ENST00000563109 CTCFLQ8NI51 663 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-207ENST00000563109 SMCR8Q8TEV9 937 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-207ENST00000563109 KIF2CQ99661 725 aa21.97■■□□□ 1.11
RAB40C-207ENST00000563109 ASCC2Q9H1I8 757 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-207ENST00000563109 FEM1BQ9UK73 627 aa21.97■■□□□ 1.11
RAB40C-207ENST00000563109 FRMPD2Q68DX3 1309 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-207ENST00000563109 GOLGA8BA8MQT2 603 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 TMEM232C9JQI7 657 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 ZBTB43O43298 467 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 KIF5BP33176 963 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 APOBRQ0VD83 1088 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 GRM4Q14833 912 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 SAMD1Q6SPF0 538 aaPredicted RBP21.96■■□□□ 1.11
RAB40C-207ENST00000563109 KCTD1Q719H9 257 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 RASGRP2Q7LDG7 609 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 FAM160B2Q86V87 743 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 MICU3Q86XE3 530 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 GTF3C2Q8WUA4 911 aaPredicted RBP21.96■■□□□ 1.11
RAB40C-207ENST00000563109 CHURC1Q8WUH1 139 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 MAP3K14Q99558 947 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 MYL10Q9BUA6 226 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 ALDH8A1Q9H2A2 487 aaPredicted RBP21.96■■□□□ 1.11
RAB40C-207ENST00000563109 ZFYVE28Q9HCC9 887 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 GPCPD1Q9NPB8 672 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 MYPNQ86TC9 1320 aa21.96■■□□□ 1.11
RAB40C-207ENST00000563109 RCAN1P53805 252 aa21.95■■□□□ 1.1
RAB40C-207ENST00000563109 TROAPQ12815 778 aa21.95■■□□□ 1.1
RAB40C-207ENST00000563109 TOB2Q14106 344 aaPredicted RBP21.95■■□□□ 1.1
RAB40C-207ENST00000563109 COG2Q14746 738 aa21.95■■□□□ 1.1
RAB40C-207ENST00000563109 SLF1Q9BQI6 1058 aa21.95■■□□□ 1.1
RAB40C-207ENST00000563109 SAGE1Q9NXZ1 904 aa21.95■■□□□ 1.1
RAB40C-207ENST00000563109 CA12O43570 354 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 ST18O60284 1047 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 CYP2C8P10632 490 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 AK2P54819 239 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 RNF186Q9NXI6 227 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 HOXC10Q9NYD6 342 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 BRPF3Q9ULD4 1205 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 A0A0G2JMZ2 1700 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 RLFQ13129 1914 aa21.94■■□□□ 1.1
RAB40C-207ENST00000563109 GOLGA8AA7E2F4 631 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 PLA2G6O60733 806 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 GOLGA8HP0CJ92 632 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 HERVK_113P62684 666 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 RAB11FIP4Q86YS3 637 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 KIFC2Q96AC6 838 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 FBXO28Q9NVF7 368 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 PPP1R9AQ9ULJ8 1098 aa21.93■■□□□ 1.1
RAB40C-207ENST00000563109 CTDP1Q9Y5B0 961 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-207ENST00000563109 SPDYE16A6NNV3 312 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-207ENST00000563109 TRPA1O75762 1119 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 RXRAP19793 462 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 DSG3P32926 999 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 GCLCP48506 637 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-207ENST00000563109 GNAQP50148 359 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 METAP2P50579 478 aaKnown RBP eCLIP21.92■■□□□ 1.1
RAB40C-207ENST00000563109 CRHR2Q13324 411 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 RTN1Q16799 776 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 CCDC144CPQ8IYA2 1237 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 JMYQ8N9B5 988 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 PRPF38AQ8NAV1 312 aaKnown RBP21.92■■□□□ 1.1
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