RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ITGB1BP2Q9UKP3 347 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 MTUS1Q9ULD2 1270 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 ELP1O95163 1332 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 NUTM2FA1L443 756 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 PHACTR2O75167 634 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 RASSF9O75901 435 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 MYL6BP14649 208 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 P3H1Q32P28 736 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 ARL6IP6Q8N6S5 226 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 TRIML2Q8N7C3 387 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 ACMSDQ8TDX5 336 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 CHAMP1Q96JM3 812 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 POLMQ9NP87 494 aaPredicted RBP10.44□□□□□ -0.74
CDH1-205ENST00000562836 SQORQ9Y6N5 450 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 A6NHS1 94 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 SLC8A1P32418 973 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 POLE2P56282 527 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 APOBRQ0VD83 1088 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 KRI1Q8N9T8 703 aaKnown RBP10.44□□□□□ -0.74
CDH1-205ENST00000562836 MAGEC3Q8TD91 643 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 UQCC2Q9BRT2 126 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 CARD11Q9BXL7 1154 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 SIL1Q9H173 461 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 ANKRD30BQ9BXX2 1392 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
CDH1-205ENST00000562836 SPTLC1O15269 473 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 ACSL4O60488 711 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 SNX2O60749 519 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 IDO1P14902 403 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 ANXA13P27216 316 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 ETFBP38117 255 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 PEX5P50542 639 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 SNX16P57768 344 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 GBE1Q04446 702 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 DGLUCYQ7Z3D6 616 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 CHST12Q9NRB3 414 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 L3MBTL1Q9Y468 752 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 C2orf81A6NN90 581 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 PENKP01210 267 aaPredicted RBP10.43□□□□□ -0.74
CDH1-205ENST00000562836 MYO1EQ12965 1108 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 CCDC158Q5M9N0 1113 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 NLGN1Q8N2Q7 840 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 GOLM1Q8NBJ4 401 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 GIMAP8Q8ND71 665 aaPredicted RBP10.43□□□□□ -0.74
CDH1-205ENST00000562836 TTC14Q96N46 770 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 SLC40A1Q9NP59 571 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 DDX25Q9UHL0 483 aaKnown RBP10.43□□□□□ -0.74
CDH1-205ENST00000562836 ASAP1Q9ULH1 1129 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 KDM6BO15054 1643 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 MBD3O95983 291 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 GPSM2P81274 684 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 MSLNQ13421 630 aaPredicted RBP10.43□□□□□ -0.74
CDH1-205ENST00000562836 C6orf183Q5T699 404 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 CEP128Q6ZU80 1094 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 SYT2Q8N9I0 419 aaPredicted RBP10.43□□□□□ -0.74
CDH1-205ENST00000562836 MSANTD4Q8NCY6 345 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 TCF12Q99081 682 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 TBCBQ99426 244 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 NELL2Q99435 816 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 B3GNT4Q9C0J1 378 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 KRT82Q9NSB4 513 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 HEY1Q9Y5J3 304 aa10.43□□□□□ -0.74
CDH1-205ENST00000562836 TSPAN1O60635 241 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 INMTO95050 263 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 TAF11Q15544 211 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 TMC4Q7Z404 712 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 RNF25Q96BH1 459 aaPredicted RBP10.42□□□□□ -0.74
CDH1-205ENST00000562836 PSKH2Q96QS6 385 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 NDNQ99608 321 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 NDEL1Q9GZM8 345 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 RABEP2Q9H5N1 569 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 SPC25Q9HBM1 224 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 TCEAL9Q9UHQ7 104 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 MAGI3Q5TCQ9 1506 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 CCDC171Q6TFL3 1326 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 EIF4E1BA6NMX2 242 aaKnown RBP10.42□□□□□ -0.74
CDH1-205ENST00000562836 MUSKO15146 869 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 MAP3K13O43283 966 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 NLRP12P59046 1061 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 MXRA7P84157 204 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 LAPTM5Q13571 262 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 SLC44A4Q53GD3 710 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 TTC39AQ5SRH9 613 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 ZSCAN25Q6NSZ9 544 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 CCAR1Q8IX12 1150 aaKnown RBP10.42□□□□□ -0.74
CDH1-205ENST00000562836 SVIPQ8NHG7 77 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 PPP2R3CQ969Q6 453 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 NSRP1Q9H0G5 558 aaKnown RBP10.42□□□□□ -0.74
CDH1-205ENST00000562836 L2HGDHQ9H9P8 463 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 EVLQ9UI08 416 aaPredicted RBP10.42□□□□□ -0.74
CDH1-205ENST00000562836 TMCO1Q9UM00 188 aa10.42□□□□□ -0.74
CDH1-205ENST00000562836 TACC1O75410 805 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 SEC24DO94855 1032 aaPredicted RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 GSTT2P0CG29 244 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 GSTT2BP0CG30 244 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 ZSCAN22P10073 491 aaPredicted RBP10.41□□□□□ -0.74
CDH1-205ENST00000562836 PSMC4P43686 418 aa10.41□□□□□ -0.74
CDH1-205ENST00000562836 USP46P62068 366 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms