RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SUPT16HQ9Y5B9 1047 aaKnown RBP11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 IVNS1ABPQ9Y6Y0 642 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RBBP6Q7Z6E9 1792 aaKnown RBP11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GSG1L2A8MUP6 293 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 PATL2C9JE40 543 aaKnown RBP11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 INHAP05111 366 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 IRF5Q13568 498 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 PLS1Q14651 629 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 MTFR1Q15390 333 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CATSPERGQ6ZRH7 1159 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SPICE1Q8N0Z3 855 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 PXYLP1Q8TE99 480 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 LPAR1Q92633 364 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 KANSL2Q9H9L4 492 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RABGAP1Q9Y3P9 1069 aa11.09□□□□□ -0.63
CHRFAM7A-204ENST00000562729 STK25O00506 426 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 FLOT1O75955 427 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 CYP2B6P20813 491 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PDE4BQ07343 736 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 COG2Q14746 738 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SBK1Q52WX2 424 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PLEKHH3Q7Z736 793 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 EXOC6Q8TAG9 804 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TXNRD2Q9NNW7 524 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 RBPJLQ9UBG7 517 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
CHRFAM7A-204ENST00000562729 A0A1W2PRG0 241 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PEX10O60683 326 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SLC34A2O95436 690 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 HMGCRP04035 888 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 EEF2P13639 858 aaKnown RBP11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 ZKSCAN1P17029 563 aaPredicted RBP11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PBX2P40425 430 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 RGS2P41220 211 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PDE1AP54750 535 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 GPR142Q7Z601 462 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 CLEC10AQ8IUN9 316 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 IFNL3Q8IZI9 196 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SEC62Q99442 399 aaKnown RBP11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 UNC93B1Q9H1C4 597 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TMX2Q9Y320 296 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
CHRFAM7A-204ENST00000562729 WDR46O15213 610 aaKnown RBP11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PRDM1O75626 825 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 GJB1P08034 283 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 GJA8P48165 433 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 CHD1LQ86WJ1 897 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 U2AF1L4Q8WU68 220 aaKnown RBP11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 DEFB118Q96PH6 123 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PORCNQ9H237 461 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 HMX1Q9NP08 348 aaPredicted RBP11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 STAP2Q9UGK3 403 aa11.06□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SMIM22K7EJ46 135 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 MFAP1P55081 439 aaKnown RBP11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PPARAQ07869 468 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 Q3C1V9 767 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 DPP9Q86TI2 863 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 MB21D1Q8N884 522 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 DPF3Q92784 378 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 APBA2Q99767 749 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 HTATIP2Q9BUP3 242 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 HELLSQ9NRZ9 838 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TOMM22Q9NS69 142 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 CLIP2Q9UDT6 1046 aa11.05□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TSPY2A6NKD2 308 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 FARP2O94887 1054 aaPredicted RBP11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SGPL1O95470 568 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 RASA1P20936 1047 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 NUCB1Q02818 461 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 MCMDC2Q4G0Z9 681 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 MFSD14CQ5VZR4 134 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 LBX2Q6XYB7 198 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SLC5A4Q9NY91 659 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 BTBD7Q9P203 1132 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 GJD2Q9UKL4 321 aa11.04□□□□□ -0.64
CHRFAM7A-204ENST00000562729 RPTORQ8N122 1335 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms