RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 AATFQ9NY61 560 aaKnown RBP eCLIP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 LRP2BPQ9P2M1 347 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 WWC3Q9ULE0 1092 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 DENND2AQ9ULE3 1009 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 SLC4A4Q9Y6R1 1079 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 BIN1O00499 593 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 LMOD1P29536 600 aaPredicted RBP8.53□□□□□ -1.04
CFDP1-202ENST00000562602 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
CFDP1-202ENST00000562602 PLCD1P51178 756 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 SPAG1Q07617 926 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 PPARAQ07869 468 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 RASGRF1Q13972 1273 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 MORC3Q14149 939 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 CCDC93Q567U6 631 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 CAVIN4Q5BKX8 364 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 JAKMIP3Q5VZ66 844 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 E4F1Q66K89 784 aaPredicted RBP8.53□□□□□ -1.04
CFDP1-202ENST00000562602 SPECC1LQ69YQ0 1117 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 PI16Q6UXB8 463 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 ZNF654Q8IZM8 581 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 ANKRD20A12PQ8NF67 263 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 TSC1Q92574 1164 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 PHKBQ93100 1093 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 ZNF775Q96BV0 537 aaPredicted RBP8.53□□□□□ -1.04
CFDP1-202ENST00000562602 GSDMAQ96QA5 445 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 BTG4Q9NY30 223 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 DNAI1Q9UI46 699 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 FBXO2Q9UK22 296 aaPredicted RBP8.53□□□□□ -1.04
CFDP1-202ENST00000562602 ZBTB1Q9Y2K1 713 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 PCDHA5Q9Y5H7 936 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 TIAM2Q8IVF5 1701 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 DDX60Q8IY21 1712 aaKnown RBP8.53□□□□□ -1.04
CFDP1-202ENST00000562602 NWD2Q9ULI1 1742 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 MROH7-TTC4A0A0A0MT08 1334 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 ROBO1Q9Y6N7 1651 aa8.53□□□□□ -1.04
CFDP1-202ENST00000562602 MYH7P12883 1935 aa8.52□□□□□ -1.04
CFDP1-202ENST00000562602 SHANK3Q9BYB0 1731 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 MAGEB6P1A0A0J9YX57 407 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 EFCAB8A8MWE9 144 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
CFDP1-202ENST00000562602 TUBBP07437 444 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 FGRP09769 529 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 SLFN14P0C7P3 912 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 HOXA7P31268 230 aaPredicted RBP8.52□□□□□ -1.05
CFDP1-202ENST00000562602 KRT2P35908 639 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 PNOCQ13519 176 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 TRIM14Q14142 442 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 LONRF3Q496Y0 759 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 METTL16Q86W50 562 aaKnown RBP8.52□□□□□ -1.05
CFDP1-202ENST00000562602 MNS1Q8NEH6 495 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 SPATA20Q8TB22 786 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 PANX2Q96RD6 677 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 BAG1Q99933 345 aaPredicted RBP8.52□□□□□ -1.05
CFDP1-202ENST00000562602 ARMT1Q9H993 441 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 EPB41L4AQ9HCS5 686 aaPredicted RBP8.52□□□□□ -1.05
CFDP1-202ENST00000562602 AAASQ9NRG9 546 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 TOMM22Q9NS69 142 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 RMND1Q9NWS8 449 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 TRMT1Q9NXH9 659 aaKnown RBP8.52□□□□□ -1.05
CFDP1-202ENST00000562602 ZNF215Q9UL58 517 aaPredicted RBP8.52□□□□□ -1.05
CFDP1-202ENST00000562602 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.52□□□□□ -1.054e-7■■■□□ 14.8
CFDP1-202ENST00000562602 ZNF804BA4D1E1 1349 aa8.52□□□□□ -1.05
CFDP1-202ENST00000562602 C4AP0C0L4 1744 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ARAP2Q8WZ64 1704 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 COL14A1Q05707 1796 aaKnown RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ANKRD36CQ5JPF3 1778 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 USP27XA6NNY8 438 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 FAM177BA6PVY3 158 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 BTBD18B2RXH4 712 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ST8SIA5O15466 376 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 POLR2DO15514 142 aaKnown RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 HOXA2O43364 376 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 MYL1P05976 194 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ZNF18P17022 549 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ZSCAN20P17040 1043 aaPredicted RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 CYP7A1P22680 504 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 CALML3P27482 149 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 CBX1P83916 185 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 CTDSPL2Q05D32 466 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 TBX2Q13207 712 aaPredicted RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ARID5BQ14865 1188 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 SF3B3Q15393 1217 aaKnown RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 IFIT1BQ5T764 474 aaKnown RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 SPATA1Q5VX52 437 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 SUSD4Q5VX71 490 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 PPFIBP1Q86W92 1011 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 CERS3Q8IU89 383 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ANKRD18AQ8IVF6 992 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 STK11IPQ8N1F8 1099 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 UBXN4Q92575 508 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 ZSCAN10Q96SZ4 725 aaPredicted RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 FANCLQ9NW38 375 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 BSDC1Q9NW68 430 aaPredicted RBP8.51□□□□□ -1.05
CFDP1-202ENST00000562602 MAN1B1Q9UKM7 699 aa8.51□□□□□ -1.05
CFDP1-202ENST00000562602 AKAP11Q9UKA4 1901 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 A0A1B0GTH6 734 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms