RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 MON2Q7Z3U7 1717 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 C5P01031 1676 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 USP54Q70EL1 1684 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 DDX3YO15523 660 aaKnown RBP7.87□□□□□ -1.15
UBR1-203ENST00000562173 RBM25P49756 843 aaKnown RBP7.87□□□□□ -1.15
UBR1-203ENST00000562173 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 NKAPLQ5M9Q1 402 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 LDLRAD1Q5T700 205 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 LLGL2Q6P1M3 1020 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 HS2ST1Q7LGA3 356 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 ERMP1Q7Z2K6 904 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 BACH2Q9BYV9 841 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 CACNA2D2Q9NY47 1150 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 ABCC6O95255 1503 aa7.87□□□□□ -1.15
UBR1-203ENST00000562173 ADCY9O60503 1353 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 NSD2O96028 1365 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 PAGE1O75459 146 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 ZNF76P36508 570 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 LIG3P49916 1009 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 ZNF157P51786 506 aaPredicted RBP7.86□□□□□ -1.15
UBR1-203ENST00000562173 TTBK2Q6IQ55 1244 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 AGMOQ6ZNB7 445 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 TMEM87AQ8NBN3 555 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 SMG8Q8ND04 991 aaKnown RBP7.86□□□□□ -1.15
UBR1-203ENST00000562173 RSRP1Q9BUV0 290 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 SEMA6BQ9H3T3 888 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 CYP4F12Q9HCS2 524 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 THRAP3Q9Y2W1 955 aaKnown RBP7.86□□□□□ -1.15
UBR1-203ENST00000562173 ITGB4P16144 1822 aa7.86□□□□□ -1.15
UBR1-203ENST00000562173 UBR3Q6ZT12 1888 aa7.85□□□□□ -1.15
UBR1-203ENST00000562173 MAP3K5Q99683 1374 aa7.85□□□□□ -1.15
UBR1-203ENST00000562173 HSPA6P17066 643 aa7.85□□□□□ -1.15
UBR1-203ENST00000562173 BMP6P22004 513 aa7.85□□□□□ -1.15
UBR1-203ENST00000562173 FANCCQ00597 558 aa7.85□□□□□ -1.15
UBR1-203ENST00000562173 EXOSC6Q5RKV6 272 aaKnown RBP7.85□□□□□ -1.15
UBR1-203ENST00000562173 DIEXFQ68CQ4 756 aaKnown RBP7.85□□□□□ -1.15
UBR1-203ENST00000562173 ARHGEF25Q86VW2 580 aa7.85□□□□□ -1.15
UBR1-203ENST00000562173 COL23A1Q86Y22 540 aaPredicted RBP7.85□□□□□ -1.15
UBR1-203ENST00000562173 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
UBR1-203ENST00000562173 RAB3GAP2Q9H2M9 1393 aa7.84□□□□□ -1.15
UBR1-203ENST00000562173 NOS3P29474 1203 aa7.84□□□□□ -1.15
UBR1-203ENST00000562173 PDE3AQ14432 1141 aa7.84□□□□□ -1.15
UBR1-203ENST00000562173 KIF4BQ2VIQ3 1234 aa7.84□□□□□ -1.15
UBR1-203ENST00000562173 FDX2Q6P4F2 183 aa7.84□□□□□ -1.15
UBR1-203ENST00000562173 CCDC84Q86UT8 332 aaPredicted RBP7.84□□□□□ -1.15
UBR1-203ENST00000562173 BCL9O00512 1426 aa7.84□□□□□ -1.15
UBR1-203ENST00000562173 EIF3AQ14152 1382 aaKnown RBP7.84□□□□□ -1.16
UBR1-203ENST00000562173 E9PSI1 815 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 DYRK3O43781 588 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 TIAF1O95411 115 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 LMNB1P20700 586 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 XP32Q5T750 250 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 NME9Q86XW9 330 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 DZIP1LQ8IYY4 767 aaKnown RBP7.83□□□□□ -1.16
UBR1-203ENST00000562173 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 STK35Q8TDR2 534 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 LTV1Q96GA3 475 aaPredicted RBP7.83□□□□□ -1.16
UBR1-203ENST00000562173 RHOVQ96L33 236 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 CCDC86Q9H6F5 360 aaKnown RBP7.83□□□□□ -1.16
UBR1-203ENST00000562173 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 HIF3AQ9Y2N7 669 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
UBR1-203ENST00000562173 BRD4O60885 1362 aaPredicted RBP7.83□□□□□ -1.16
UBR1-203ENST00000562173 TTC21BQ7Z4L5 1316 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 EXOC5O00471 708 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 DLGAP3O95886 979 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 CTSBP07858 339 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 GLB1P16278 677 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 BRCA1P38398 1863 aaKnown RBP7.82□□□□□ -1.16
UBR1-203ENST00000562173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBR1-203ENST00000562173 DNAJC5GQ8N7S2 189 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 RNF34Q969K3 372 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 GAL3ST3Q96A11 431 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 TMEM74Q96NL1 305 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 WDR18Q9BV38 432 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 SSBP4Q9BWG4 385 aaPredicted RBP7.82□□□□□ -1.16
UBR1-203ENST00000562173 MEGF6O75095 1541 aa7.82□□□□□ -1.16
UBR1-203ENST00000562173 CD163L1Q9NR16 1453 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 CCDC88AQ3V6T2 1871 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 MAP2P11137 1827 aaKnown RBP7.81□□□□□ -1.16
UBR1-203ENST00000562173 AOC2O75106 756 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 ECEL1O95672 775 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 ADH5P11766 374 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 TCF3P15923 654 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 IREB2P48200 963 aaKnown RBP7.81□□□□□ -1.16
UBR1-203ENST00000562173 LMNB2Q03252 620 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 MAP1SQ66K74 1059 aaPredicted RBP7.81□□□□□ -1.16
UBR1-203ENST00000562173 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.81□□□□□ -1.16
UBR1-203ENST00000562173 RELL1Q8IUW5 271 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 TRIM42Q8IWZ5 723 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 AGGF1Q8N302 714 aaeCLIP7.81□□□□□ -1.16
UBR1-203ENST00000562173 USHBP1Q8N6Y0 703 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 KCNB2Q92953 911 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 SYTL4Q96C24 671 aaPredicted RBP7.81□□□□□ -1.16
UBR1-203ENST00000562173 FAM46AQ96IP4 442 aaKnown RBP7.81□□□□□ -1.16
UBR1-203ENST00000562173 NMRK2Q9NPI5 230 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
UBR1-203ENST00000562173 GGT7Q9UJ14 662 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms