RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DSG3P32926 999 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 IRX3P78415 501 aaPredicted RBP15.79■□□□□ 0.12
CDH1-204ENST00000562118 LACTBP83111 547 aaPredicted RBP15.79■□□□□ 0.12
CDH1-204ENST00000562118 EXOSC10Q01780 885 aaKnown RBP15.79■□□□□ 0.12
CDH1-204ENST00000562118 SP3Q02447 781 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 KRT32Q14532 448 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 COG2Q14746 738 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 ADCK5Q3MIX3 580 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 SLFN13Q68D06 897 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 BTNL9Q6UXG8 535 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 TXNRD2Q9NNW7 524 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 RBPJLQ9UBG7 517 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 PPP1R9AQ9ULJ8 1098 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 RABGAP1Q9Y3P9 1069 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 SNX14Q9Y5W7 946 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 CENPFP49454 3210 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 CTGFP29279 349 aa15.78■□□□□ 0.12
CDH1-204ENST00000562118 ATP2B2Q01814 1243 aa15.78■□□□□ 0.12
CDH1-204ENST00000562118 FAM83BQ5T0W9 1011 aa15.78■□□□□ 0.12
CDH1-204ENST00000562118 RALYLQ86SE5 291 aaKnown RBP15.78■□□□□ 0.12
CDH1-204ENST00000562118 MB21D1Q8N884 522 aa15.78■□□□□ 0.12
CDH1-204ENST00000562118 ZKSCAN3Q9BRR0 538 aa15.78■□□□□ 0.12
CDH1-204ENST00000562118 HOXC10Q9NYD6 342 aa15.78■□□□□ 0.12
CDH1-204ENST00000562118 CPA4Q9UI42 421 aa15.78■□□□□ 0.12
CDH1-204ENST00000562118 ATP2A1O14983 1001 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 BMP3P12645 472 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 ZKSCAN1P17029 563 aaPredicted RBP15.77■□□□□ 0.12
CDH1-204ENST00000562118 MCM5P33992 734 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 LIFRP42702 1097 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 RASGRP2Q7LDG7 609 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 SGMS1Q86VZ5 419 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 PNMA1Q8ND90 353 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 SMCR8Q8TEV9 937 aaPredicted RBP15.77■□□□□ 0.12
CDH1-204ENST00000562118 TMEM87BQ96K49 555 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.12
CDH1-204ENST00000562118 UBAC1Q9BSL1 405 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 AGXT2Q9BYV1 514 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 LY9Q9HBG7 655 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 FEM1BQ9UK73 627 aa15.77■□□□□ 0.12
CDH1-204ENST00000562118 SH2B2O14492 632 aaPredicted RBP15.76■□□□□ 0.11
CDH1-204ENST00000562118 FLOT1O75955 427 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 SEC24BO95487 1268 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 HMGB1P09429 215 aaKnown RBP15.76■□□□□ 0.11
CDH1-204ENST00000562118 ANAPC15P60006 121 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 ERVK-9P63128 1117 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 ERVK-24P63145 666 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 ZNF543Q08ER8 600 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 TROAPQ12815 778 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDH1-204ENST00000562118 ERO1AQ96HE7 468 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 NEK1Q96PY6 1258 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 MAP3K14Q99558 947 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 SLF1Q9BQI6 1058 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 TM6SF1Q9BZW5 370 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 TANGO6Q9C0B7 1094 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 FBXO28Q9NVF7 368 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 BTBD7Q9P203 1132 aa15.76■□□□□ 0.11
CDH1-204ENST00000562118 VWA5AO00534 786 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 PRC1O43663 620 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 GNRH1P01148 92 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 FDX1P10109 184 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 SLC1A4P43007 532 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 IFIT1BQ5T764 474 aaKnown RBP15.75■□□□□ 0.11
CDH1-204ENST00000562118 DHX32Q7L7V1 743 aaKnown RBP15.75■□□□□ 0.11
CDH1-204ENST00000562118 FAM160B2Q86V87 743 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 ANKRD13CQ8N6S4 541 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 PRPF38AQ8NAV1 312 aaKnown RBP15.75■□□□□ 0.11
CDH1-204ENST00000562118 ATG4CQ96DT6 458 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 SLC38A10Q9HBR0 1119 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 ZNF214Q9UL59 606 aaPredicted RBP15.75■□□□□ 0.11
CDH1-204ENST00000562118 NID2Q14112 1375 aa15.75■□□□□ 0.11
CDH1-204ENST00000562118 MCCP23508 829 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 STAT2P52630 851 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 OAZ1P54368 228 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 SART3Q15020 963 aaKnown RBP15.74■□□□□ 0.11
CDH1-204ENST00000562118 Q3C1V9 767 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 GPATCH4Q5T3I0 446 aaKnown RBP15.74■□□□□ 0.11
CDH1-204ENST00000562118 SHCBP1Q8NEM2 672 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 GPRC5AQ8NFJ5 357 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 CD99L2Q8TCZ2 262 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 KAT14Q9H8E8 782 aa15.74■□□□□ 0.11
CDH1-204ENST00000562118 RBBP6Q7Z6E9 1792 aaKnown RBP15.73■□□□□ 0.11
CDH1-204ENST00000562118 IFIT3O14879 490 aaKnown RBP15.73■□□□□ 0.11
CDH1-204ENST00000562118 TMEM132BQ14DG7 1078 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 WTAPQ15007 396 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 ASPRV1Q53RT3 343 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 CHST3Q7LGC8 479 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 OTOP1Q7RTM1 612 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 CTU1Q7Z7A3 348 aaKnown RBP15.73■□□□□ 0.11
CDH1-204ENST00000562118 TMTC2Q8N394 836 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 TRIM47Q96LD4 638 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 ARHGAP39Q9C0H5 1083 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 ZSWIM6Q9HCJ5 1215 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 SMCHD1A6NHR9 2005 aa15.73■□□□□ 0.11
CDH1-204ENST00000562118 MYH6P13533 1939 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 ZNFX1Q9P2E3 1918 aaKnown RBP15.72■□□□□ 0.11
CDH1-204ENST00000562118 ZNF536O15090 1300 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 BRCA2P51587 3418 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms