RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 KIAA0556O60303 1618 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 NKG7Q16617 165 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 TMEM201Q5SNT2 666 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 PRAMEF13Q5VWM6 474 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 DUSP27Q5VZP5 1158 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 RUFY4Q6ZNE9 571 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 LSRQ86X29 649 aaPredicted RBP5.86□□□□□ -1.47
LRRC28-222ENST00000561431 KSR1Q8IVT5 923 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 ATG4CQ96DT6 458 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 TM9SF2Q99805 663 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 FOXQ1Q9C009 403 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 ACSS3Q9H6R3 686 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 ACTR10Q9NZ32 417 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 SLC5A6Q9Y289 635 aa5.86□□□□□ -1.47
LRRC28-222ENST00000561431 MAPKBP1O60336 1514 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 CCDC85CA6NKD9 419 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-222ENST00000561431 GUCY2CP25092 1073 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 ARMCX6Q7L4S7 300 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 ATG4DQ86TL0 474 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-222ENST00000561431 MRPL41Q8IXM3 137 aaKnown RBP5.85□□□□□ -1.47
LRRC28-222ENST00000561431 HNRNPLLQ8WVV9 542 aaKnown RBP5.85□□□□□ -1.47
LRRC28-222ENST00000561431 FAM168AQ92567 244 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 CCDC74BQ96LY2 380 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 KIF2CQ99661 725 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 SEMA6CQ9H3T2 930 aa5.85□□□□□ -1.47
LRRC28-222ENST00000561431 GSX1Q9H4S2 264 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-222ENST00000561431 EEA1Q15075 1411 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 LRIG2O94898 1065 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 NME1P15531 152 aaKnown RBP5.84□□□□□ -1.47
LRRC28-222ENST00000561431 NTF4P34130 210 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 CYP27A1Q02318 531 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 FXNQ16595 210 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 UBE3DQ7Z6J8 389 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 TTC6Q86TZ1 520 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 FAM169BQ8N8A8 192 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 MFSD2AQ8NA29 543 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 RBBP8NLQ8NC74 664 aaPredicted RBP5.84□□□□□ -1.47
LRRC28-222ENST00000561431 MIPEPQ99797 713 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 ZSWIM4Q9H7M6 989 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 ST7Q9NRC1 585 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 SLC12A7Q9Y666 1083 aa5.84□□□□□ -1.47
LRRC28-222ENST00000561431 KIF13AQ9H1H9 1805 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 TNIKQ9UKE5 1360 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 MEIS3P2A8K0S8 358 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 DNAJA2O60884 412 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 DDAH1O94760 285 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 CST3P01034 146 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-222ENST00000561431 RBL2Q08999 1139 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 CDK5R2Q13319 367 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 SLBPQ14493 270 aaKnown RBP eCLIP5.83□□□□□ -1.48
LRRC28-222ENST00000561431 CDCP2Q5VXM1 449 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 DPH6Q7L8W6 267 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 CILP2Q8IUL8 1156 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 SLFN12Q8IYM2 578 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 STK11IPQ8N1F8 1099 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 DHRS1Q96LJ7 313 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 CNNM2Q9H8M5 875 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 TPX2Q9ULW0 747 aaKnown RBP5.83□□□□□ -1.48
LRRC28-222ENST00000561431 DIP2BQ9P265 1576 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 ABCC2Q92887 1545 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 UHRF1BP1LA0JNW5 1464 aa5.83□□□□□ -1.48
LRRC28-222ENST00000561431 PTPRGP23470 1445 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 KIF21BO75037 1637 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 SAMD9Q5K651 1589 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 DYNC1LI2O43237 492 aaPredicted RBP5.82□□□□□ -1.48
LRRC28-222ENST00000561431 CLEC3AO75596 197 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 POLR2BP30876 1174 aaKnown RBP5.82□□□□□ -1.48
LRRC28-222ENST00000561431 MESP2Q0VG99 397 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 BMS1Q14692 1282 aaKnown RBP5.82□□□□□ -1.48
LRRC28-222ENST00000561431 CCDC144BQ3MJ40 725 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 NBPF6Q5VWK0 638 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 INTS3Q68E01 1043 aaKnown RBP5.82□□□□□ -1.48
LRRC28-222ENST00000561431 LETMD1Q6P1Q0 360 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 UNC5AQ6ZN44 842 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 TOP6BLQ8N6T0 577 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 BAHD1Q8TBE0 780 aaPredicted RBP5.82□□□□□ -1.48
LRRC28-222ENST00000561431 CYB5D2Q8WUJ1 264 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 NBPF4Q96M43 638 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 SLC9A7Q96T83 725 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 LNPKQ9C0E8 428 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 TNKS2Q9H2K2 1166 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 PRDM10Q9NQV6 1147 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 FAM86C1Q9NVL1 165 aa5.82□□□□□ -1.48
LRRC28-222ENST00000561431 A0A1W2PQH9 124 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 RNASE1P07998 156 aaKnown RBP5.81□□□□□ -1.48
LRRC28-222ENST00000561431 FUT4P22083 530 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 CAP2P40123 477 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 ETV3P41162 512 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 BNIP3Q12983 259 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 RAB33AQ14088 237 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 GNPTABQ3T906 1256 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 ARHGAP27Q6ZUM4 889 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 C19orf47Q8N9M1 422 aaKnown RBP5.81□□□□□ -1.48
LRRC28-222ENST00000561431 UBE2Q2Q8WVN8 375 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 MRFAP1L1Q96HT8 127 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 SRPK1Q96SB4 655 aaKnown RBP5.81□□□□□ -1.48
LRRC28-222ENST00000561431 SLC38A3Q99624 504 aa5.81□□□□□ -1.48
LRRC28-222ENST00000561431 OSBPL2Q9H1P3 480 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms