RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ERCC3P19447 782 aa20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 CACNB2Q08289 660 aaPredicted RBP20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 VPS53Q5VIR6 699 aa20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 ZNF444Q8N0Y2 327 aaPredicted RBP20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 DIS3LQ8TF46 1054 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 CEP95Q96GE4 821 aa20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 FAM227BQ96M60 508 aa20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 ZNF287Q9HBT7 754 aa20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 FLRT1Q9NZU1 646 aa20.49■□□□□ 0.87
CDC42BPB-208ENST00000561271 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
CDC42BPB-208ENST00000561271 CCND3P30281 292 aaPredicted RBP20.48■□□□□ 0.87
CDC42BPB-208ENST00000561271 CHD1LQ86WJ1 897 aa20.48■□□□□ 0.87
CDC42BPB-208ENST00000561271 NPLOC4Q8TAT6 608 aa20.48■□□□□ 0.87
CDC42BPB-208ENST00000561271 NYAP2Q9P242 653 aa20.48■□□□□ 0.87
CDC42BPB-208ENST00000561271 LCTP09848 1927 aa20.48■□□□□ 0.87
CDC42BPB-208ENST00000561271 H0YGN5 161 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 NDUFB10O96000 172 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 SLC3A2P08195 630 aaKnown RBP20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 NUCB1Q02818 461 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 CTDSPL2Q05D32 466 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 PDE4BQ07343 736 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 TMEM132BQ14DG7 1078 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 FAM47AQ5JRC9 791 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 NCAPG2Q86XI2 1143 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 SHCBP1Q8NEM2 672 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 DPF3Q92784 378 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 HTATIP2Q9BUP3 242 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 PPP1R9AQ9ULJ8 1098 aa20.47■□□□□ 0.87
CDC42BPB-208ENST00000561271 HOXC6P09630 235 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 ADORA2AP29274 412 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 NMIQ13287 307 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 PLEKHM2Q8IWE5 1019 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 RILPL2Q969X0 211 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 PAWRQ96IZ0 340 aaKnown RBP20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 HELLSQ9NRZ9 838 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
CDC42BPB-208ENST00000561271 F5H6K3 240 aa20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 IRX6P78412 446 aaPredicted RBP20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 KLRC3Q07444 240 aa20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 NEDD1Q8NHV4 660 aa20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 MROH8Q9H579 483 aa20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 MTMR4Q9NYA4 1195 aa20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 ADAMTS5Q9UNA0 930 aa20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDC42BPB-208ENST00000561271 VWA5AO00534 786 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 TTLL1O95922 423 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 TFAP4Q01664 338 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 MFSD14CQ5VZR4 134 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 DPP9Q86TI2 863 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 ANKLE1Q8NAG6 615 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 REPS2Q8NFH8 660 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 SLF1Q9BQI6 1058 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 INCENPQ9NQS7 918 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 OGDHLQ9ULD0 1010 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 LRRC37A2A6NM11 1700 aa20.44■□□□□ 0.86
CDC42BPB-208ENST00000561271 CAPN2P17655 700 aa20.43■□□□□ 0.86
CDC42BPB-208ENST00000561271 CYP2C19P33261 490 aa20.43■□□□□ 0.86
CDC42BPB-208ENST00000561271 MNX1P50219 401 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-208ENST00000561271 MCMDC2Q4G0Z9 681 aa20.43■□□□□ 0.86
CDC42BPB-208ENST00000561271 ZNF214Q9UL59 606 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-208ENST00000561271 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
CDC42BPB-208ENST00000561271 CCDC171Q6TFL3 1326 aa20.43■□□□□ 0.86
CDC42BPB-208ENST00000561271 STRNO43815 780 aa20.42■□□□□ 0.86
CDC42BPB-208ENST00000561271 COBLO75128 1261 aa20.42■□□□□ 0.86
CDC42BPB-208ENST00000561271 SLC34A2O95436 690 aa20.42■□□□□ 0.86
CDC42BPB-208ENST00000561271 NECAB2Q7Z6G3 386 aa20.42■□□□□ 0.86
CDC42BPB-208ENST00000561271 RIOX2Q8IUF8 465 aa20.42■□□□□ 0.86
CDC42BPB-208ENST00000561271 OSBPL3Q9H4L5 887 aa20.42■□□□□ 0.86
CDC42BPB-208ENST00000561271 TSPY2A6NKD2 308 aa20.41■□□□□ 0.86
CDC42BPB-208ENST00000561271 SLC25A27O95847 323 aa20.41■□□□□ 0.86
CDC42BPB-208ENST00000561271 GMCL1P1Q8NEA9 526 aa20.41■□□□□ 0.86
CDC42BPB-208ENST00000561271 MKL1Q969V6 931 aa20.41■□□□□ 0.86
CDC42BPB-208ENST00000561271 ANAPC4Q9UJX5 808 aa20.41■□□□□ 0.86
CDC42BPB-208ENST00000561271 DNAH12Q6ZR08 3092 aa20.41■□□□□ 0.86
CDC42BPB-208ENST00000561271 NMT2O60551 498 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 ZMYM6O95789 1325 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 IGHA2P01877 340 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 HSPD1P10809 573 aaKnown RBP20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 FCER1AP12319 257 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 CYBAP13498 195 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 STAT3P40763 770 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 ALX1Q15699 326 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 SLFN13Q68D06 897 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 LHX8Q68G74 356 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 ABRAQ8N0Z2 381 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 TRPV1Q8NER1 839 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 CHMP4CQ96CF2 233 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 MMP19Q99542 508 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 ISY1Q9ULR0 285 aaKnown RBP20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 SYNPO2Q9UMS6 1093 aa20.4■□□□□ 0.86
CDC42BPB-208ENST00000561271 LTBP2Q14767 1821 aa20.39■□□□□ 0.86
CDC42BPB-208ENST00000561271 EVI5O60447 810 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 FGAP02671 866 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 SDSP20132 328 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 CNGA1P29973 690 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms