RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 P2RX7Q99572 595 aaKnown RBP12.51□□□□□ -0.41
TPM1-229ENST00000561242 PTPN18Q99952 460 aa12.51□□□□□ -0.41
TPM1-229ENST00000561242 EFCC1Q9HA90 598 aa12.51□□□□□ -0.41
TPM1-229ENST00000561242 GPCPD1Q9NPB8 672 aa12.51□□□□□ -0.41
TPM1-229ENST00000561242 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
TPM1-229ENST00000561242 NEDD4P46934 1319 aa12.51□□□□□ -0.41
TPM1-229ENST00000561242 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 FOXP2O15409 715 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 NMT2O60551 498 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
TPM1-229ENST00000561242 SLC25A27O95847 323 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 CASTP20810 708 aaKnown RBP12.5□□□□□ -0.41
TPM1-229ENST00000561242 MAPK4P31152 587 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 HSPA4P34932 840 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 JAG1P78504 1218 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 PKN2Q16513 984 aaKnown RBP12.5□□□□□ -0.41
TPM1-229ENST00000561242 ASPRV1Q53RT3 343 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 LZTS2Q9BRK4 669 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 USP26Q9BXU7 913 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 PRDM10Q9NQV6 1147 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 BIN2Q9UBW5 565 aaPredicted RBP12.5□□□□□ -0.41
TPM1-229ENST00000561242 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
TPM1-229ENST00000561242 MYPNQ86TC9 1320 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 ECM29Q5VYK3 1845 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 DOCK2Q92608 1830 aa12.5□□□□□ -0.41
TPM1-229ENST00000561242 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 A0A1W2PRG0 241 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 SMIM22K7EJ46 135 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 DSG3P32926 999 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 PSMC4P43686 418 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 PRMT2P55345 433 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 ANAPC15P60006 121 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
TPM1-229ENST00000561242 TSGA10IPQ3SY00 556 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
TPM1-229ENST00000561242 NBPF11Q86T75 865 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 NCAPG2Q86XI2 1143 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 CPXCR1Q8N123 301 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 RAET1EQ8TD07 263 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 MPHOSPH6Q99547 160 aaKnown RBP12.49□□□□□ -0.41
TPM1-229ENST00000561242 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 IL25Q9H293 177 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 TRIM17Q9Y577 477 aa12.49□□□□□ -0.41
TPM1-229ENST00000561242 POLR2AP24928 1970 aaKnown RBP12.49□□□□□ -0.41
TPM1-229ENST00000561242 PLIN4Q96Q06 1357 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 HSPA8P11142 646 aaKnown RBP12.48□□□□□ -0.41
TPM1-229ENST00000561242 FAM110CQ1W6H9 321 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 KCTD1Q719H9 257 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 ENAHQ8N8S7 591 aaPredicted RBP12.48□□□□□ -0.41
TPM1-229ENST00000561242 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 ZNF296Q8WUU4 475 aaPredicted RBP12.48□□□□□ -0.41
TPM1-229ENST00000561242 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 VAT1LQ9HCJ6 419 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 IL17RBQ9NRM6 502 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 PDRG1Q9NUG6 133 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 FBXO40Q9UH90 709 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
TPM1-229ENST00000561242 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
TPM1-229ENST00000561242 FRMPD2Q68DX3 1309 aaPredicted RBP12.47□□□□□ -0.41
TPM1-229ENST00000561242 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 B4DLN1 442 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 CPLX1O14810 134 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 DDAH1O94760 285 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 STAT3P40763 770 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 LIFRP42702 1097 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 MRPL12P52815 198 aaKnown RBP12.47□□□□□ -0.41
TPM1-229ENST00000561242 KCTD2Q14681 263 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 PPP2R5BQ15173 497 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 SYDE2Q5VT97 1194 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 CYB5R4Q7L1T6 521 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 CTU1Q7Z7A3 348 aaKnown RBP12.47□□□□□ -0.41
TPM1-229ENST00000561242 DPP9Q86TI2 863 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 CD99L2Q8TCZ2 262 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 ANKS1AQ92625 1134 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 NUP88Q99567 741 aaPredicted RBP12.47□□□□□ -0.41
TPM1-229ENST00000561242 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.47□□□□□ -0.41
TPM1-229ENST00000561242 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 MROH8Q9H579 483 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
TPM1-229ENST00000561242 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
TPM1-229ENST00000561242 ZBTB43O43298 467 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 ST18O60284 1047 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 FCER1AP12319 257 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 ERVK-9P63128 1117 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 ERVK-24P63145 666 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 DGKZQ13574 1117 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 CCDC174Q6PII3 467 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 C17orf99Q6UX52 265 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 Q6ZUG5 572 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 RUFY3Q7L099 469 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
TPM1-229ENST00000561242 RRP36Q96EU6 259 aaKnown RBP12.46□□□□□ -0.41
TPM1-229ENST00000561242 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
TPM1-229ENST00000561242 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms