RNA–Protein interactions for RNA: ENST00000561217.1

TNFAIP2-211, Transcript of TNF alpha induced protein 2, humanhuman

TSL 3

Gene TNFAIP2, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-211ENST00000561217 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 GPR108Q9NPR9 543 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
TNFAIP2-211ENST00000561217 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 ZNFX1Q9P2E3 1918 aaKnown RBP12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 IGSF3O75054 1194 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 GNAI2P04899 355 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 ERCC3P19447 782 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 SHMT1P34896 483 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 USP5P45974 858 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 RARSP54136 660 aaKnown RBP12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 TLE2Q04725 743 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 GRIN2CQ14957 1233 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 ZNF512BQ96KM6 892 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 SPATC1LQ9H0A9 340 aa12.57□□□□□ -0.4
TNFAIP2-211ENST00000561217 A0A1W2PRG0 241 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 STRNO43815 780 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 CLTBP09497 229 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 COL9A1P20849 921 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 PLCD1P51178 756 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 COG2Q14746 738 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 SEPT2Q15019 361 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 TJAP1Q5JTD0 557 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 SHCBP1Q8NEM2 672 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 PHF24Q9UPV7 400 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 TNNQ9UQP3 1299 aa12.56□□□□□ -0.4
TNFAIP2-211ENST00000561217 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 MYO9BQ13459 2157 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 IDH1O75874 414 aaKnown RBP12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 DNAJB2P25686 324 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 TTC6Q86TZ1 520 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 CERS3Q8IU89 383 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 MAML3Q96JK9 1138 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 TANGO6Q9C0B7 1094 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 TACC3Q9Y6A5 838 aa12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 COL11A1P12107 1806 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP2-211ENST00000561217 TNFRSF10AO00220 468 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 TRIM27P14373 513 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 RAG1P15918 1043 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 FPGSQ05932 587 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 GABPAQ06546 454 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 ABRAQ8N0Z2 381 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 XPNPEP3Q9NQH7 507 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 HOXC10Q9NYD6 342 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 RAPGEFL1Q9UHV5 662 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 NCOR1O75376 2440 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 ROBO3Q96MS0 1386 aa12.54□□□□□ -0.4
TNFAIP2-211ENST00000561217 MYH8P13535 1937 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 A0A1W2PQ45 241 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 A0A1W2PQY0 241 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 PQBP1O60828 265 aaKnown RBP12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 PGK1P00558 417 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 RARBP10826 455 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 PLS1Q14651 629 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 NCAPG2Q86XI2 1143 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 MB21D1Q8N884 522 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 MROH8Q9H579 483 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 ZNF576Q9H609 170 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 CHD9Q3L8U1 2897 aa12.53□□□□□ -0.4
TNFAIP2-211ENST00000561217 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 MPHOSPH10O00566 681 aaKnown RBP12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 RNF180Q86T96 592 aa12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 LENG1Q96BZ8 264 aaPredicted RBP12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 RIOK1Q9BRS2 568 aaKnown RBP12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 CCDC8Q9H0W5 538 aaPredicted RBP12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
TNFAIP2-211ENST00000561217 SURF6O75683 361 aaKnown RBP12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 FLOT1O75955 427 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 FCER1AP12319 257 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 TAL1P17542 331 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 FAAP100Q0VG06 881 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 SPICE1Q8N0Z3 855 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 CLUAP1Q96AJ1 413 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 TIFAQ96CG3 184 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
TNFAIP2-211ENST00000561217 ADAMTS4O75173 837 aa12.5□□□□□ -0.41
TNFAIP2-211ENST00000561217 BCAR3O75815 825 aa12.5□□□□□ -0.41
TNFAIP2-211ENST00000561217 PGK2P07205 417 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms