RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	GOPC	Q9HD26	462 aa		32.41	■■■□□ 2.78
SNRPA1-215	ENST00000561187		A0A1W2PPC1	479 aa		32.4	■■■□□ 2.78
SNRPA1-215	ENST00000561187	RNF113A	O15541	343 aa	Known RBP	32.4	■■■□□ 2.78
SNRPA1-215	ENST00000561187	GPAA1	O43292	621 aa		32.4	■■■□□ 2.78
SNRPA1-215	ENST00000561187	ATN1	P54259	1190 aa	Predicted RBP	32.4	■■■□□ 2.78
SNRPA1-215	ENST00000561187	PRAMEF19	Q5SWL8	479 aa		32.4	■■■□□ 2.78
SNRPA1-215	ENST00000561187	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.4	■■■□□ 2.78
SNRPA1-215	ENST00000561187	STRN	O43815	780 aa		32.39	■■■□□ 2.78
SNRPA1-215	ENST00000561187	RASA1	P20936	1047 aa		32.39	■■■□□ 2.78
SNRPA1-215	ENST00000561187	TDO2	P48775	406 aa		32.39	■■■□□ 2.78
SNRPA1-215	ENST00000561187	MROH8	Q9H579	483 aa		32.39	■■■□□ 2.78
SNRPA1-215	ENST00000561187	MKNK2	Q9HBH9	465 aa		32.39	■■■□□ 2.78
SNRPA1-215	ENST00000561187	PCDHB15	Q9Y5E8	787 aa		32.39	■■■□□ 2.78
SNRPA1-215	ENST00000561187	GREB1L	Q9C091	1923 aa	Predicted RBP	32.39	■■■□□ 2.78
SNRPA1-215	ENST00000561187	APP	P05067	770 aa		32.38	■■■□□ 2.77
SNRPA1-215	ENST00000561187	GJC2	Q5T442	439 aa	Predicted RBP	32.38	■■■□□ 2.77
SNRPA1-215	ENST00000561187	OLFML2B	Q68BL8	750 aa		32.38	■■■□□ 2.77
SNRPA1-215	ENST00000561187	MSC	O60682	206 aa		32.37	■■■□□ 2.77
SNRPA1-215	ENST00000561187	PRDM1	O75626	825 aa		32.37	■■■□□ 2.77
SNRPA1-215	ENST00000561187	PGK2	P07205	417 aa		32.36	■■■□□ 2.77
SNRPA1-215	ENST00000561187	MDM2	Q00987	491 aa	Predicted RBP	32.36	■■■□□ 2.77
SNRPA1-215	ENST00000561187	SBK1	Q52WX2	424 aa		32.36	■■■□□ 2.77
SNRPA1-215	ENST00000561187	SEC62	Q99442	399 aa	Known RBP	32.36	■■■□□ 2.77
SNRPA1-215	ENST00000561187	MMP19	Q99542	508 aa		32.36	■■■□□ 2.77
SNRPA1-215	ENST00000561187	PPP1R9A	Q9ULJ8	1098 aa		32.36	■■■□□ 2.77
SNRPA1-215	ENST00000561187	ROBO3	Q96MS0	1386 aa		32.35	■■■□□ 2.77
SNRPA1-215	ENST00000561187	IGHA2	P01877	340 aa		32.35	■■■□□ 2.77
SNRPA1-215	ENST00000561187	FCER1A	P12319	257 aa		32.35	■■■□□ 2.77
SNRPA1-215	ENST00000561187	MAML3	Q96JK9	1138 aa		32.35	■■■□□ 2.77
SNRPA1-215	ENST00000561187	UBE2O	Q9C0C9	1292 aa	Known RBP	32.35	■■■□□ 2.77
SNRPA1-215	ENST00000561187	SLC5A4	Q9NY91	659 aa		32.35	■■■□□ 2.77
SNRPA1-215	ENST00000561187	VWA5A	O00534	786 aa		32.34	■■■□□ 2.77
SNRPA1-215	ENST00000561187	BMP8B	P34820	402 aa		32.34	■■■□□ 2.77
SNRPA1-215	ENST00000561187	DNM1L	O00429	736 aa		32.33	■■■□□ 2.77
SNRPA1-215	ENST00000561187	ZFY	P08048	801 aa	Predicted RBP	32.33	■■■□□ 2.77
SNRPA1-215	ENST00000561187	FSD1	Q9BTV5	496 aa		32.33	■■■□□ 2.77
SNRPA1-215	ENST00000561187	ZNFX1	Q9P2E3	1918 aa	Known RBP	32.33	■■■□□ 2.77
SNRPA1-215	ENST00000561187	SLC25A27	O95847	323 aa		32.32	■■■□□ 2.76
SNRPA1-215	ENST00000561187	SLC4A3	P48751	1232 aa		32.32	■■■□□ 2.76
SNRPA1-215	ENST00000561187	GIMAP6	Q6P9H5	292 aa		32.32	■■■□□ 2.76
SNRPA1-215	ENST00000561187	RIOX2	Q8IUF8	465 aa		32.32	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ABRA	Q8N0Z2	381 aa		32.32	■■■□□ 2.76
SNRPA1-215	ENST00000561187	NDUFB10	O96000	172 aa		32.31	■■■□□ 2.76
SNRPA1-215	ENST00000561187	STAT3	P40763	770 aa		32.31	■■■□□ 2.76
SNRPA1-215	ENST00000561187	PI4K2B	Q8TCG2	481 aa		32.31	■■■□□ 2.76
SNRPA1-215	ENST00000561187	CLIP2	Q9UDT6	1046 aa		32.31	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ZNF214	Q9UL59	606 aa	Predicted RBP	32.31	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ADAMTS5	Q9UNA0	930 aa		32.31	■■■□□ 2.76
SNRPA1-215	ENST00000561187	MYH4	Q9Y623	1939 aa		32.31	■■■□□ 2.76
SNRPA1-215	ENST00000561187	SEPT4	O43236	478 aa		32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	KCTD2	Q14681	263 aa		32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	FAM47A	Q5JRC9	791 aa		32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	TDH	Q8IZJ6	230 aa		32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	LRRC47	Q8N1G4	583 aa	Known RBP	32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	REPS2	Q8NFH8	660 aa		32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	SLF1	Q9BQI6	1058 aa		32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ATP11B	Q9Y2G3	1177 aa		32.3	■■■□□ 2.76
SNRPA1-215	ENST00000561187	TTC41P	Q6P2S7	1318 aa		32.29	■■■□□ 2.76
SNRPA1-215	ENST00000561187	KBTBD13	C9JR72	458 aa		32.29	■■■□□ 2.76
SNRPA1-215	ENST00000561187		F5H6K3	240 aa		32.29	■■■□□ 2.76
SNRPA1-215	ENST00000561187	GNAT2	P19087	354 aa		32.29	■■■□□ 2.76
SNRPA1-215	ENST00000561187	RTP1	P59025	263 aa		32.29	■■■□□ 2.76
SNRPA1-215	ENST00000561187	KLRC3	Q07444	240 aa		32.29	■■■□□ 2.76
SNRPA1-215	ENST00000561187	PLXNA1	Q9UIW2	1896 aa		32.29	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ERC2	O15083	957 aa		32.28	■■■□□ 2.76
SNRPA1-215	ENST00000561187	RRP1	P56182	461 aa	Known RBP	32.28	■■■□□ 2.76
SNRPA1-215	ENST00000561187	IFNL3	Q8IZI9	196 aa		32.28	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ZNF444	Q8N0Y2	327 aa	Predicted RBP	32.28	■■■□□ 2.76
SNRPA1-215	ENST00000561187	CHMP4C	Q96CF2	233 aa		32.28	■■■□□ 2.76
SNRPA1-215	ENST00000561187	NYAP2	Q9P242	653 aa		32.28	■■■□□ 2.76
SNRPA1-215	ENST00000561187	SNRNP48	Q6IEG0	339 aa	Known RBP	32.27	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ARRDC4	Q8NCT1	418 aa		32.27	■■■□□ 2.76
SNRPA1-215	ENST00000561187	FERMT2	Q96AC1	680 aa		32.27	■■■□□ 2.76
SNRPA1-215	ENST00000561187	CEP95	Q96GE4	821 aa		32.27	■■■□□ 2.76
SNRPA1-215	ENST00000561187	ISY1	Q9ULR0	285 aa	Known RBP	32.27	■■■□□ 2.76
SNRPA1-215	ENST00000561187	PATL2	C9JE40	543 aa	Known RBP	32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	TAL1	P17542	331 aa	Predicted RBP	32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	MX1	P20591	662 aa		32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	LRRFIP1	Q32MZ4	808 aa	Known RBP	32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	CCDC129	Q6ZRS4	1044 aa		32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	CPXCR1	Q8N123	301 aa		32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	KIFC2	Q96AC6	838 aa		32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	LENG1	Q96BZ8	264 aa	Predicted RBP	32.26	■■■□□ 2.75
SNRPA1-215	ENST00000561187	IGKV6D-41	A0A0C4DH26	115 aa		32.25	■■■□□ 2.75
SNRPA1-215	ENST00000561187		Q7L0L9	218 aa		32.25	■■■□□ 2.75
SNRPA1-215	ENST00000561187	CRBN	Q96SW2	442 aa		32.25	■■■□□ 2.75
SNRPA1-215	ENST00000561187	NAPB	Q9H115	298 aa		32.25	■■■□□ 2.75
SNRPA1-215	ENST00000561187	SMCHD1	A6NHR9	2005 aa		32.24	■■■□□ 2.75
SNRPA1-215	ENST00000561187	ZNF792	Q3KQV3	632 aa		32.24	■■■□□ 2.75
SNRPA1-215	ENST00000561187	TEX13B	Q9BXU2	312 aa		32.24	■■■□□ 2.75
SNRPA1-215	ENST00000561187	NACAP1	Q9BZK3	213 aa		32.24	■■■□□ 2.75
SNRPA1-215	ENST00000561187	PRDM5	Q9NQX1	630 aa	Predicted RBP	32.24	■■■□□ 2.75
SNRPA1-215	ENST00000561187	RIPK3	Q9Y572	518 aa		32.24	■■■□□ 2.75
SNRPA1-215	ENST00000561187	CTDP1	Q9Y5B0	961 aa	Predicted RBP	32.24	■■■□□ 2.75
SNRPA1-215	ENST00000561187	COL6A3	P12111	3177 aa		32.23	■■■□□ 2.75
SNRPA1-215	ENST00000561187	ADCYAP1R1	P41586	468 aa		32.23	■■■□□ 2.75
SNRPA1-215	ENST00000561187	LRRC41	Q15345	812 aa		32.23	■■■□□ 2.75
SNRPA1-215	ENST00000561187	LBHD1	Q9BQE6	289 aa	Predicted RBP	32.23	■■■□□ 2.75
SNRPA1-215	ENST00000561187	TINF2	Q9BSI4	451 aa		32.23	■■■□□ 2.75
SNRPA1-215	ENST00000561187	ZNF287	Q9HBT7	754 aa		32.23	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms