RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MICALL2Q8IY33 904 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 ZNF713Q8N859 430 aaPredicted RBP19.7■□□□□ 0.74
HDDC3-206ENST00000561036 BICD2Q8TD16 824 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 CCDC12Q8WUD4 166 aaPredicted RBP19.7■□□□□ 0.74
HDDC3-206ENST00000561036 DCAF4Q8WV16 495 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 DDX19AQ9NUU7 478 aaKnown RBP19.7■□□□□ 0.74
HDDC3-206ENST00000561036 PGAP2Q9UHJ9 254 aa19.7■□□□□ 0.74
HDDC3-206ENST00000561036 CNOT7Q9UIV1 285 aaKnown RBP19.7■□□□□ 0.74
HDDC3-206ENST00000561036 EEF2P13639 858 aaKnown RBP19.69■□□□□ 0.74
HDDC3-206ENST00000561036 ICA1Q05084 483 aa19.69■□□□□ 0.74
HDDC3-206ENST00000561036 DAGLBQ8NCG7 672 aa19.69■□□□□ 0.74
HDDC3-206ENST00000561036 TNFRSF25Q93038 417 aa19.69■□□□□ 0.74
HDDC3-206ENST00000561036 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.69■□□□□ 0.74
HDDC3-206ENST00000561036 BARHL2Q9NY43 387 aa19.69■□□□□ 0.74
HDDC3-206ENST00000561036 SEC63Q9UGP8 760 aaKnown RBP19.69■□□□□ 0.74
HDDC3-206ENST00000561036 MTMR7Q9Y216 660 aa19.69■□□□□ 0.74
HDDC3-206ENST00000561036 GJA3Q9Y6H8 435 aa19.69■□□□□ 0.74
HDDC3-206ENST00000561036 DICER1Q9UPY3 1922 aaKnown RBP19.68■□□□□ 0.74
HDDC3-206ENST00000561036 H7C1D1 291 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 GOLGA8HP0CJ92 632 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 ATP2B2Q01814 1243 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 NR5A1Q13285 461 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 SEPT2Q15019 361 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 PTPAQ15257 358 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 NPY5RQ15761 445 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 LRSAM1Q6UWE0 723 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 CLEC10AQ8IUN9 316 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 GMCL1P1Q8NEA9 526 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 OXER1Q8TDS5 423 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 NOL7Q9UMY1 257 aaKnown RBP19.68■□□□□ 0.74
HDDC3-206ENST00000561036 PCDHA7Q9UN72 937 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 CEP131Q9UPN4 1083 aa19.68■□□□□ 0.74
HDDC3-206ENST00000561036 MYH4Q9Y623 1939 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 STXBP3O00186 592 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 BMP15O95972 392 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 GH2P01242 217 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 SLURP2P0DP57 97 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 LIG1P18858 919 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 TRAPPC10P48553 1259 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 TOB1P50616 345 aaPredicted RBP19.67■□□□□ 0.74
HDDC3-206ENST00000561036 SIAH1Q8IUQ4 282 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 GPC2Q8N158 579 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 TMEM39BQ9GZU3 492 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 PCDHA4Q9UN74 947 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 ZNF541Q9H0D2 1346 aa19.67■□□□□ 0.74
HDDC3-206ENST00000561036 SHTN1A0MZ66 631 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 GDF11O95390 407 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 MRE11P49959 708 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 RASA3Q14644 834 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 KIF4BQ2VIQ3 1234 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 WWC2Q6AWC2 1192 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 CCDC73Q6ZRK6 1079 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 HEATR3Q7Z4Q2 680 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 CCAR1Q8IX12 1150 aaKnown RBP19.66■□□□□ 0.74
HDDC3-206ENST00000561036 BLIDQ8IZY5 108 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 GMCL1Q96IK5 515 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 SYT17Q9BSW7 474 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 GINM1Q9NU53 330 aa19.66■□□□□ 0.74
HDDC3-206ENST00000561036 ESYT2A0FGR8 921 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 SYCE3A1L190 88 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 VEGFAP15692 232 aaPredicted RBP19.65■□□□□ 0.74
HDDC3-206ENST00000561036 CCDC96Q2M329 555 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 SLFN13Q68D06 897 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 PIBF1Q8WXW3 757 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
HDDC3-206ENST00000561036 NUP62CLQ9H1M0 184 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 ARHGEF10LQ9HCE6 1279 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 DACT1Q9NYF0 836 aa19.65■□□□□ 0.74
HDDC3-206ENST00000561036 FRMPD2Q68DX3 1309 aaPredicted RBP19.65■□□□□ 0.74
HDDC3-206ENST00000561036 TRIM75PA6NK02 468 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 CUTAO60888 179 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 CMA1P23946 247 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 FAM160A1Q05DH4 1040 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 RRP1BQ14684 758 aaKnown RBP19.64■□□□□ 0.73
HDDC3-206ENST00000561036 AXDND1Q5T1B0 1012 aaPredicted RBP19.64■□□□□ 0.73
HDDC3-206ENST00000561036 PPP1R18Q6NYC8 613 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 RASGRP2Q7LDG7 609 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 GAS2L3Q86XJ1 694 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 FSIP1Q8NA03 581 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 GPKOWQ92917 476 aaPredicted RBP eCLIP19.64■□□□□ 0.73
HDDC3-206ENST00000561036 MTMR8Q96EF0 704 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 ZMYND12Q9H0C1 365 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 CLSTN2Q9H4D0 955 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 GPCPD1Q9NPB8 672 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 GPRC5DQ9NZD1 345 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 ZBTB21Q9ULJ3 1066 aa19.64■□□□□ 0.73
HDDC3-206ENST00000561036 PNMA6FA0A0J9YX94 578 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 GNA11P29992 359 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 SLC1A4P43007 532 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 JAG1P78504 1218 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 TPRNQ4KMQ1 711 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 SAMD7Q7Z3H4 446 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 APOBEC3FQ8IUX4 373 aaKnown RBP19.63■□□□□ 0.73
HDDC3-206ENST00000561036 HOOK2Q96ED9 719 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 TEPSINQ96N21 525 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 PIGSQ96S52 555 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 UBA5Q9GZZ9 404 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 C6orf50Q9HD87 102 aa19.63■□□□□ 0.73
HDDC3-206ENST00000561036 F5H6K3 240 aa19.62■□□□□ 0.73
HDDC3-206ENST00000561036 M0R2N6 131 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms