RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CYP27A1Q02318 531 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 KCTD16Q68DU8 428 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 WDR59Q6PJI9 974 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 AENQ8WTP8 325 aaKnown RBP18.5■□□□□ 0.55
TPM1-228ENST00000560975 PSMB7Q99436 277 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 JPH2Q9BR39 696 aaPredicted RBP18.5■□□□□ 0.55
TPM1-228ENST00000560975 NAPBQ9H115 298 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 TBC1D2BQ9UPU7 963 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 SPEF2Q9C093 1822 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 XDHP47989 1333 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 LRRC10BA6NIK2 292 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 ZEB2O60315 1214 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 SH2D3CQ8N5H7 860 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 EEF2KMTQ96G04 330 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 RPGRIP1Q96KN7 1286 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 LRRC1Q9BTT6 524 aa18.5■□□□□ 0.55
TPM1-228ENST00000560975 KRT86O43790 486 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 USP8P40818 1118 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 CABP4P57796 275 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 SPAG1Q07617 926 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 WTAPQ15007 396 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 METTL24Q5JXM2 366 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 SMCR8Q8TEV9 937 aaPredicted RBP18.49■□□□□ 0.55
TPM1-228ENST00000560975 SMARCAL1Q9NZC9 954 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 PSEN1P49768 467 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 CCDC70Q6NSX1 233 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 SHISA4Q96DD7 197 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 RWDD2AQ9UIY3 292 aa18.49■□□□□ 0.55
TPM1-228ENST00000560975 IBSPP21815 317 aaPredicted RBP18.48■□□□□ 0.55
TPM1-228ENST00000560975 ATP6V1AP38606 617 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 OTUD6BQ8N6M0 293 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 TSEN2Q8NCE0 465 aaKnown RBP18.48■□□□□ 0.55
TPM1-228ENST00000560975 RUFY1Q96T51 708 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 EPB41L4AQ9HCS5 686 aaPredicted RBP18.48■□□□□ 0.55
TPM1-228ENST00000560975 MYO5AQ9Y4I1 1855 aaKnown RBP18.48■□□□□ 0.55
TPM1-228ENST00000560975 KIAA0754O94854 1291 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 PARP1P09874 1014 aaKnown RBP18.48■□□□□ 0.55
TPM1-228ENST00000560975 PDE6AP16499 860 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 TTMPQ5BVD1 217 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 EP400NLQ6ZTU2 488 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 PPARDQ03181 441 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 GPIHBP1Q8IV16 184 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 CNPY4Q8N129 248 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 MB21D1Q8N884 522 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 FAM89AQ96GI7 184 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
TPM1-228ENST00000560975 ORAI2Q96SN7 254 aa18.48■□□□□ 0.55
TPM1-228ENST00000560975 GOLGA8KD6RF30 607 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 KRT83P78385 493 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 SETQ01105 290 aaPredicted RBP18.47■□□□□ 0.55
TPM1-228ENST00000560975 TCIRG1Q13488 830 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 MFSD6Q6ZSS7 791 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 IFNL3Q8IZI9 196 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 AGPAT5Q9NUQ2 364 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 EHD2Q9NZN4 543 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 GBP6Q6ZN66 633 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 MTRQ99707 1265 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 SH3GL2Q99962 352 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 ARMT1Q9H993 441 aa18.47■□□□□ 0.55
TPM1-228ENST00000560975 CYP27B1O15528 508 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 IPO7O95373 1038 aaKnown RBP18.46■□□□□ 0.55
TPM1-228ENST00000560975 CCDC172P0C7W6 258 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 CXCR5P32302 372 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 PRCPP42785 496 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 KLK7P49862 253 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 MMP14P50281 582 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 PRKAB2O43741 272 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 OPA1O60313 960 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 MBD4O95243 580 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 IRF2BP1Q8IU81 584 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 PRPF38AQ8NAV1 312 aaKnown RBP18.46■□□□□ 0.55
TPM1-228ENST00000560975 FANCBQ8NB91 859 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 EHBP1Q8NDI1 1231 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 DNAJC7Q99615 494 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 CD248Q9HCU0 757 aa18.46■□□□□ 0.55
TPM1-228ENST00000560975 SLIT3O75094 1523 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 ERICH2A1L162 156 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 PTGDRQ13258 359 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 AKNAD1Q5T1N1 836 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 CABS1Q96KC9 395 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 PCMTD1Q96MG8 357 aaPredicted RBP18.45■□□□□ 0.54
TPM1-228ENST00000560975 IFIT5Q13325 482 aaKnown RBP18.45■□□□□ 0.54
TPM1-228ENST00000560975 RNF187Q5TA31 235 aaPredicted RBP18.45■□□□□ 0.54
TPM1-228ENST00000560975 IQCEQ6IPM2 695 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
TPM1-228ENST00000560975 NHEJ1Q9H9Q4 299 aaPredicted RBP18.45■□□□□ 0.54
TPM1-228ENST00000560975 HSF2BPO75031 334 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 CYLC1P35663 651 aaPredicted RBP18.44■□□□□ 0.54
TPM1-228ENST00000560975 KRT2P35908 639 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 TDO2P48775 406 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 PMS1P54277 932 aaKnown RBP18.44■□□□□ 0.54
TPM1-228ENST00000560975 UBE3CQ15386 1083 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 KRT26Q7Z3Y9 468 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 ZNF654Q8IZM8 581 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 B4DLN1 442 aa18.44■□□□□ 0.54
TPM1-228ENST00000560975 KRT14P02533 472 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms