RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 TRIOBPQ9H2D6 2365 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 GLRX3O76003 335 aaKnown RBP13.39□□□□□ -0.27
GABPB1-210ENST00000560825 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-210ENST00000560825 RGS2P41220 211 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 FAM47AQ5JRC9 791 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 REPS2Q8NFH8 660 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 FAM227BQ96M60 508 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 ARHGEF10LQ9HCE6 1279 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
GABPB1-210ENST00000560825 LAMA4Q16363 1823 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 COL6A3P12111 3177 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 SLC15A5A6NIM6 579 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 PATL2C9JE40 543 aaKnown RBP13.38□□□□□ -0.27
GABPB1-210ENST00000560825 RAD21O60216 631 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 NMT2O60551 498 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 APPP05067 770 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 TDO2P48775 406 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 PLS1Q14651 629 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 PRAMEF19Q5SWL8 479 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 ANO1Q5XXA6 986 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 CEP95Q96GE4 821 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 CCDC17Q96LX7 622 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
GABPB1-210ENST00000560825 OGDHLQ9ULD0 1010 aa13.38□□□□□ -0.27
GABPB1-210ENST00000560825 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
GABPB1-210ENST00000560825 NDUFB10O96000 172 aa13.37□□□□□ -0.27
GABPB1-210ENST00000560825 ZFYP08048 801 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-210ENST00000560825 ADORA2AP29274 412 aa13.37□□□□□ -0.27
GABPB1-210ENST00000560825 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
GABPB1-210ENST00000560825 GIMAP6Q6P9H5 292 aa13.37□□□□□ -0.27
GABPB1-210ENST00000560825 ZNF589Q86UQ0 364 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-210ENST00000560825 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
GABPB1-210ENST00000560825 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-210ENST00000560825 LPAR1Q92633 364 aa13.37□□□□□ -0.27
GABPB1-210ENST00000560825 PRO3102Q9H379 93 aa13.37□□□□□ -0.27
GABPB1-210ENST00000560825 KANSL2Q9H9L4 492 aa13.37□□□□□ -0.27
GABPB1-210ENST00000560825 RIPK3Q9Y572 518 aa13.37□□□□□ -0.27
GABPB1-210ENST00000560825 F5H6K3 240 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 VWA5AO00534 786 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 ERC2O15083 957 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 PGK2P07205 417 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 HOXC6P09630 235 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 TAL1P17542 331 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-210ENST00000560825 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-210ENST00000560825 KLRC3Q07444 240 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
GABPB1-210ENST00000560825 MKNK2Q9HBH9 465 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 IL17RBQ9NRM6 502 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 HOXC10Q9NYD6 342 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 ZNF214Q9UL59 606 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-210ENST00000560825 LTBP2Q14767 1821 aa13.36□□□□□ -0.27
GABPB1-210ENST00000560825 EYSQ5T1H1 3165 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 CCNA1P78396 465 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 PPARAQ07869 468 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 AMOTL1Q8IY63 956 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 DDRGK1Q96HY6 314 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 NBPF3Q9H094 633 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 MTMR4Q9NYA4 1195 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 PPP1R9AQ9ULJ8 1098 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
GABPB1-210ENST00000560825 LRRC37A2A6NM11 1700 aa13.35□□□□□ -0.27
GABPB1-210ENST00000560825 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
GABPB1-210ENST00000560825 COL6A1P12109 1028 aa13.34□□□□□ -0.27
GABPB1-210ENST00000560825 CYBAP13498 195 aa13.34□□□□□ -0.27
GABPB1-210ENST00000560825 SYN1P17600 705 aa13.34□□□□□ -0.27
GABPB1-210ENST00000560825 NMIQ13287 307 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-210ENST00000560825 C7orf61Q8IZ16 206 aa13.34□□□□□ -0.27
GABPB1-210ENST00000560825 CWC22Q9HCG8 908 aaKnown RBP13.34□□□□□ -0.27
GABPB1-210ENST00000560825 NYAP2Q9P242 653 aa13.34□□□□□ -0.27
GABPB1-210ENST00000560825 ZMYND8Q9ULU4 1186 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-210ENST00000560825 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
GABPB1-210ENST00000560825 GNAT2P19087 354 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 TFAP4Q01664 338 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 LRRC26Q2I0M4 334 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 NECAB2Q7Z6G3 386 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 SHCBP1Q8NEM2 672 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 LENG1Q96BZ8 264 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-210ENST00000560825 NAPBQ9H115 298 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 IL25Q9H293 177 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
GABPB1-210ENST00000560825 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
GABPB1-210ENST00000560825 HAX1O00165 279 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 EVI5O60447 810 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 CNGA1P29973 690 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 SNAP25P60880 206 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 DPP9Q86TI2 863 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 MKL1Q969V6 931 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
GABPB1-210ENST00000560825 MAML3Q96JK9 1138 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms