RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 TINF2Q9BSI4 451 aa21.59■■□□□ 1.05
TSPAN3-208ENST00000560514 STARD7Q9NQZ5 370 aa21.59■■□□□ 1.05
TSPAN3-208ENST00000560514 CCDC129Q6ZRS4 1044 aa21.58■■□□□ 1.05
TSPAN3-208ENST00000560514 RIOK1Q9BRS2 568 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-208ENST00000560514 ANTXR1Q9H6X2 564 aa21.58■■□□□ 1.05
TSPAN3-208ENST00000560514 TNNQ9UQP3 1299 aa21.58■■□□□ 1.05
TSPAN3-208ENST00000560514 CNPY2Q9Y2B0 182 aa21.58■■□□□ 1.05
TSPAN3-208ENST00000560514 PLXNA1Q9UIW2 1896 aa21.58■■□□□ 1.04
TSPAN3-208ENST00000560514 MYO9BQ13459 2157 aa21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 ICA1Q05084 483 aa21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 TTF1Q15361 905 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 IL27Q8NEV9 243 aa21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 EAF2Q96CJ1 260 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 TOX2Q96NM4 488 aa21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 TSEN34Q9BSV6 310 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 SWAP70Q9UH65 585 aa21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 DIS3Q9Y2L1 958 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-208ENST00000560514 CCER2I3L3R5 266 aa21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 WDR46O15213 610 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 PGK2P07205 417 aa21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 TMEM132BQ14DG7 1078 aa21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 ANKRD33Q7Z3H0 272 aa21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 ATXN2LQ8WWM7 1075 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 VCPKMTQ9H867 229 aa21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 NOP58Q9Y2X3 529 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 TMX2Q9Y320 296 aa21.56■■□□□ 1.04
TSPAN3-208ENST00000560514 COL11A1P12107 1806 aaPredicted RBP21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 TIMP1P01033 207 aa21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 FAAP100Q0VG06 881 aa21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 PPIGQ13427 754 aaKnown RBP eCLIP21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 KIAA1755Q5JYT7 1200 aa21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 TMEM57Q8N5G2 664 aa21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 THEGQ9P2T0 379 aa21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 MROH7Q68CQ1 1323 aa21.55■■□□□ 1.04
TSPAN3-208ENST00000560514 MUC3AQ02505 3323 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 ROBO3Q96MS0 1386 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 MOXD2PA6NHM9 499 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 COPB2P35606 906 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 ACLYP53396 1101 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 SLC9C2Q5TAH2 1124 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 RIOX2Q8IUF8 465 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.54■■□□□ 1.042e-7■■■■□ 20.1
TSPAN3-208ENST00000560514 C1orf115Q9H7X2 142 aa21.54■■□□□ 1.04
TSPAN3-208ENST00000560514 PARP14Q460N5 1801 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 RAD21O60216 631 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 TAL1P17542 331 aaPredicted RBP21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 STAT3P40763 770 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 ZNF792Q3KQV3 632 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 AACSQ86V21 672 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 AMOTL1Q8IY63 956 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 SDR42E1Q8WUS8 393 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 VTI1AQ96AJ9 217 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 GLT1D1Q96MS3 346 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 FAM184BQ9ULE4 1060 aa21.53■■□□□ 1.04
TSPAN3-208ENST00000560514 ADAMTS4O75173 837 aa21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 ZNF865P0CJ78 1059 aaPredicted RBP21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 AKNAD1Q5T1N1 836 aa21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 ZKSCAN2Q63HK3 967 aa21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 MFSD5Q6N075 450 aa21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 CLEC10AQ8IUN9 316 aa21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 LENG1Q96BZ8 264 aaPredicted RBP21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 CCDC17Q96LX7 622 aa21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 PRDM12Q9H4Q4 367 aa21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 DCP1AQ9NPI6 582 aaPredicted RBP21.52■■□□□ 1.04
TSPAN3-208ENST00000560514 SYNRGQ9UMZ2 1314 aa21.52■■□□□ 1.03
TSPAN3-208ENST00000560514 APBB1O00213 710 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 AKR1B1P15121 316 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 PDE6AP16499 860 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 EVX2Q03828 476 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 ERC1Q8IUD2 1116 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 TMEM199Q8N511 208 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 ASB2Q96Q27 587 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 PBX4Q9BYU1 374 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 SPC25Q9HBM1 224 aa21.51■■□□□ 1.03
TSPAN3-208ENST00000560514 CYP2D6P10635 497 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 MRPS5P82675 430 aaKnown RBP21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 KCNA10Q16322 511 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 MSL3Q8N5Y2 521 aaKnown RBP21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 ADAMTS19Q8TE59 1207 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 DDX11Q96FC9 970 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 DYNLL2Q96FJ2 89 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 GOPCQ9HD26 462 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 MSRAQ9UJ68 235 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 ZHX1Q9UKY1 873 aaPredicted RBP21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 ADAMTS5Q9UNA0 930 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 ZNF532Q9HCE3 1301 aa21.5■■□□□ 1.03
TSPAN3-208ENST00000560514 VWA5AO00534 786 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 IGFBP4P22692 258 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 RAB30Q15771 203 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 PSRC1Q6PGN9 363 aaPredicted RBP21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 SIAH1Q8IUQ4 282 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 PCSK9Q8NBP7 692 aaKnown RBP21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 DDRGK1Q96HY6 314 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 UHRF1Q96T88 793 aaPredicted RBP21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 MTIF3Q9H2K0 278 aaKnown RBP21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 FBXO28Q9NVF7 368 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 TBX21Q9UL17 535 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 PPP1R9AQ9ULJ8 1098 aa21.49■■□□□ 1.03
TSPAN3-208ENST00000560514 ELP1O95163 1332 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms