RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SLC1A4P43007 532 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 JAG1P78504 1218 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 KLRC3Q07444 240 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 SAFBQ15424 915 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRAF3-209ENST00000560463 PKN1Q16512 942 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 SLFN13Q68D06 897 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 KRT40Q6A162 431 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 USP17L2Q6R6M4 530 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 CLEC10AQ8IUN9 316 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 RRP36Q96EU6 259 aaKnown RBP9.95□□□□□ -0.82
TRAF3-209ENST00000560463 AS3MTQ9HBK9 375 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 SCAF8Q9UPN6 1271 aaKnown RBP9.95□□□□□ -0.82
TRAF3-209ENST00000560463 SSC5DA1L4H1 1573 aa9.95□□□□□ -0.82
TRAF3-209ENST00000560463 POTECB2RU33 542 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 PPP1R12BO60237 982 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 MMP1P03956 469 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 BMP3P12645 472 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 VEGFAP15692 232 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 NF2P35240 595 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 RESTQ13127 1097 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 SHROOM1Q2M3G4 852 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 NOL9Q5SY16 702 aaKnown RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 MCTP1Q6DN14 999 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 KRT26Q7Z3Y9 468 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 SCYL3Q8IZE3 742 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 CCDC12Q8WUD4 166 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 AIFM3Q96NN9 605 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 FOXP1Q9H334 677 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 VCPKMTQ9H867 229 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
TRAF3-209ENST00000560463 MTMR7Q9Y216 660 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 WDR81Q562E7 1941 aa9.94□□□□□ -0.82
TRAF3-209ENST00000560463 A0A1W2PRG0 241 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 CYTH3O43739 400 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 PLA2G6O60733 806 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 USP2O75604 605 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-209ENST00000560463 NDUFB10O96000 172 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 GOLGA8HP0CJ92 632 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 U2AF2P26368 475 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRAF3-209ENST00000560463 CALML3P27482 149 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 IREB2P48200 963 aaKnown RBP9.93□□□□□ -0.82
TRAF3-209ENST00000560463 USP14P54578 494 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 KRT85P78386 507 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 GUCY1B3Q02153 619 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 KIF23Q02241 960 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-209ENST00000560463 GNL2Q13823 731 aaKnown RBP9.93□□□□□ -0.82
TRAF3-209ENST00000560463 CCDC96Q2M329 555 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 GALNT17Q6IS24 598 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 BTNL9Q6UXG8 535 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 FERMT3Q86UX7 667 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 CCDC148Q8NFR7 591 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 LPAR1Q92633 364 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 WRNIP1Q96S55 665 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 WDR18Q9BV38 432 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 PHF20Q9BVI0 1012 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 SCAND2PQ9GZW5 306 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-209ENST00000560463 BRMS1Q9HCU9 246 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 GPCPD1Q9NPB8 672 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 PICK1Q9NRD5 415 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 CFAP45Q9UL16 551 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 KIAA1217Q5T5P2 1943 aa9.93□□□□□ -0.82
TRAF3-209ENST00000560463 FRMPD2Q68DX3 1309 aaPredicted RBP9.92□□□□□ -0.82
TRAF3-209ENST00000560463 PNMA6FA0A0J9YX94 578 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 UNCXA6NJT0 531 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 INPP5BP32019 993 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 ECE1P42892 770 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 TRAF1Q13077 416 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 MAP3K11Q16584 847 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 SKOR2Q2VWA4 1001 aaPredicted RBP9.92□□□□□ -0.82
TRAF3-209ENST00000560463 EAPPQ56P03 285 aaPredicted RBP9.92□□□□□ -0.82
TRAF3-209ENST00000560463 OTUD7BQ6GQQ9 843 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 KCTD1Q719H9 257 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 ADGRF4Q8IZF3 695 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 TMEM87AQ8NBN3 555 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRAF3-209ENST00000560463 CHURC1Q8WUH1 139 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 MTMR8Q96EF0 704 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 CDCA5Q96FF9 252 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
TRAF3-209ENST00000560463 KIAA1683Q9H0B3 1180 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 JMJD4Q9H9V9 463 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 BARHL2Q9NY43 387 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 A0A0G2JMZ2 1700 aa9.92□□□□□ -0.82
TRAF3-209ENST00000560463 ELP1O95163 1332 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 hCG_1642624A0A1W2PR95 340 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 ESYT2A0FGR8 921 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 C19orf81C9J6K1 198 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 ADM5C9JUS6 153 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 UBE2Q2LH0YL09 131 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 ZBTB5O15062 677 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 WDR46O15213 610 aaKnown RBP9.91□□□□□ -0.82
TRAF3-209ENST00000560463 RAD21O60216 631 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 PTPRAP18433 802 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 KRT2P35908 639 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 STAT2P52630 851 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms