RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 POSTNQ15063 836 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 RCSD1Q6JBY9 416 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 METTL16Q86W50 562 aaKnown RBP11.09□□□□□ -0.63
RTF1-206ENST00000560447 AMIGO3Q86WK7 504 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 SP8Q8IXZ3 490 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 FLAD1Q8NFF5 587 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
RTF1-206ENST00000560447 RTFDC1Q9BY42 306 aaPredicted RBP11.09□□□□□ -0.63
RTF1-206ENST00000560447 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 PYCARDQ9ULZ3 195 aa11.09□□□□□ -0.63
RTF1-206ENST00000560447 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
RTF1-206ENST00000560447 CYP2D7A0A087X1C5 515 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 C2orf72A6NCS6 295 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 hCG_1984214I3L0E3 225 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 UFL1O94874 794 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 PLEKHA8P1O95397 391 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 ERCC5P28715 1186 aaPredicted RBP11.08□□□□□ -0.64
RTF1-206ENST00000560447 NOVP48745 357 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 GPSM2P81274 684 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 TFAP4Q01664 338 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 NR5A1Q13285 461 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 ZNF444Q8N0Y2 327 aaPredicted RBP11.08□□□□□ -0.64
RTF1-206ENST00000560447 SRBD1Q8N5C6 995 aaKnown RBP11.08□□□□□ -0.64
RTF1-206ENST00000560447 ZNF713Q8N859 430 aaPredicted RBP11.08□□□□□ -0.64
RTF1-206ENST00000560447 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 CCDC12Q8WUD4 166 aaPredicted RBP11.08□□□□□ -0.64
RTF1-206ENST00000560447 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
RTF1-206ENST00000560447 SMARCE1Q969G3 411 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 MKNK2Q9HBH9 465 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 VPS54Q9P1Q0 977 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 PCDHB6Q9Y5E3 794 aa11.08□□□□□ -0.64
RTF1-206ENST00000560447 UQCRHLA0A096LP55 91 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 LAD1O00515 517 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 CCP110O43303 1012 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 ACTN4O43707 911 aaKnown RBP11.07□□□□□ -0.64
RTF1-206ENST00000560447 RRP9O43818 475 aaKnown RBP11.07□□□□□ -0.64
RTF1-206ENST00000560447 PRDM1O75626 825 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 UQCRHP07919 91 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 SLFN14P0C7P3 912 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 NLRP5P59047 1200 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 MORC3Q14149 939 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 NPY5RQ15761 445 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 TTC38Q5R3I4 469 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 C16orf86Q6ZW13 317 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 SH3RF1Q7Z6J0 888 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 CCDC112Q8NEF3 446 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 NEDD1Q8NHV4 660 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 ENOX1Q8TC92 643 aaKnown RBP11.07□□□□□ -0.64
RTF1-206ENST00000560447 SH3RF3Q8TEJ3 882 aaPredicted RBP11.07□□□□□ -0.64
RTF1-206ENST00000560447 GSDMAQ96QA5 445 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 SPZ1Q9BXG8 430 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 COA1Q9GZY4 146 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 PAXBP1Q9Y5B6 917 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
RTF1-206ENST00000560447 PALM3A6NDB9 673 aaPredicted RBP11.06□□□□□ -0.64
RTF1-206ENST00000560447 UBE2Q2LH0YL09 131 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 POLRMTO00411 1230 aaKnown RBP11.06□□□□□ -0.64
RTF1-206ENST00000560447 POLR2DO15514 142 aaKnown RBP11.06□□□□□ -0.64
RTF1-206ENST00000560447 USP17L8P0C7I0 530 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 LONP1P36776 959 aaKnown RBP11.06□□□□□ -0.64
RTF1-206ENST00000560447 FANCCQ00597 558 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 PNOCQ13519 176 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 SYCP1Q15431 976 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 CCDC144BQ3MJ40 725 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 KRT27Q7Z3Y8 459 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 NLGN1Q8N2Q7 840 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 CCDC82Q8N4S0 544 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 TBC1D16Q8TBP0 767 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 GTPBP4Q9BZE4 634 aaKnown RBP11.06□□□□□ -0.64
RTF1-206ENST00000560447 XPO4Q9C0E2 1151 aaKnown RBP11.06□□□□□ -0.64
RTF1-206ENST00000560447 CSRNP2Q9H175 543 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 PCDHA4Q9UN74 947 aa11.06□□□□□ -0.64
RTF1-206ENST00000560447 GREB1LQ9C091 1923 aaPredicted RBP11.05□□□□□ -0.64
RTF1-206ENST00000560447 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
RTF1-206ENST00000560447 PLSCR1O15162 318 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 MYL1P05976 194 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 CYP2D6P10635 497 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 RASA1P20936 1047 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 ALDH1B1P30837 517 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 HOXA7P31268 230 aaPredicted RBP11.05□□□□□ -0.64
RTF1-206ENST00000560447 TXLNAP40222 546 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 PRPHP41219 470 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 BTDP43251 543 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 SMIM5Q71RC9 77 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 TEX11Q8IYF3 940 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 BLIDQ8IZY5 108 aa11.05□□□□□ -0.64
RTF1-206ENST00000560447 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms