RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 OTOFQ9HC10 1997 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 CALM1P0DP23 149 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 CALM2P0DP24 149 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 CALM3P0DP25 149 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 SNHG28P0DPA3 235 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 PDHBP11177 359 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 BMP3P12645 472 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 OSBPP22059 807 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
USP8-209ENST00000560297 KIAA1755Q5JYT7 1200 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 GPATCH4Q5T3I0 446 aaKnown RBP14.34□□□□□ -0.11
USP8-209ENST00000560297 CATSPERGQ6ZRH7 1159 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 RPAP3Q9H6T3 665 aaPredicted RBP14.34□□□□□ -0.11
USP8-209ENST00000560297 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
USP8-209ENST00000560297 HOXC10Q9NYD6 342 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 PNMA3Q9UL41 463 aa14.34□□□□□ -0.11
USP8-209ENST00000560297 MYH8P13535 1937 aa14.33□□□□□ -0.11
USP8-209ENST00000560297 GREB1LQ9C091 1923 aaPredicted RBP14.33□□□□□ -0.11
USP8-209ENST00000560297 PDHXO00330 501 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 PLA2G6O60733 806 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 DDAH1O94760 285 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 RCAN1P53805 252 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 EVCP57679 992 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 TROAPQ12815 778 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 COG2Q14746 738 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 PPP2R5BQ15173 497 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 TREML2Q5T2D2 321 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 ZNF654Q8IZM8 581 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 CHURC1Q8WUH1 139 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 BRF1Q92994 677 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 SENP2Q9HC62 589 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 FEM1BQ9UK73 627 aa14.33□□□□□ -0.12
USP8-209ENST00000560297 IGF2BP3O00425 579 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP8-209ENST00000560297 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
USP8-209ENST00000560297 KIF5BP33176 963 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 IRX3P78415 501 aaPredicted RBP14.32□□□□□ -0.12
USP8-209ENST00000560297 ZNF543Q08ER8 600 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 DGKZQ13574 1117 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 TOB2Q14106 344 aaPredicted RBP14.32□□□□□ -0.12
USP8-209ENST00000560297 CCDC96Q2M329 555 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 ASPRV1Q53RT3 343 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 APOA5Q6Q788 366 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 FAM160B2Q86V87 743 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 FAM43AQ8N2R8 423 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 ZNF274Q96GC6 653 aaPredicted RBP14.32□□□□□ -0.12
USP8-209ENST00000560297 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 ASCC2Q9H1I8 757 aaPredicted RBP14.32□□□□□ -0.12
USP8-209ENST00000560297 MTMR7Q9Y216 660 aa14.32□□□□□ -0.12
USP8-209ENST00000560297 ATAD5Q96QE3 1844 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 KLF18A0A0U1RQI7 1052 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 TMEM232C9JQI7 657 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 ZBTB43O43298 467 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 ST18O60284 1047 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 FLOT1O75955 427 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 GNAQP50148 359 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 STAT2P52630 851 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 APOBRQ0VD83 1088 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 PRPF38AQ8NAV1 312 aaKnown RBP14.31□□□□□ -0.12
USP8-209ENST00000560297 FANCBQ8NB91 859 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
USP8-209ENST00000560297 GTF3C2Q8WUA4 911 aaPredicted RBP14.31□□□□□ -0.12
USP8-209ENST00000560297 NUP133Q8WUM0 1156 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 PARK7Q99497 189 aaKnown RBP14.31□□□□□ -0.12
USP8-209ENST00000560297 NUP88Q99567 741 aaPredicted RBP14.31□□□□□ -0.12
USP8-209ENST00000560297 BEGAINQ9BUH8 593 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 ZFYVE28Q9HCC9 887 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 ISY1Q9ULR0 285 aaKnown RBP14.31□□□□□ -0.12
USP8-209ENST00000560297 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
USP8-209ENST00000560297 PHIPQ8WWQ0 1821 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 CCDC196A0A1B0GTZ2 297 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
USP8-209ENST00000560297 CA12O43570 354 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 FDX1P10109 184 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 AK2P54819 239 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 IKQ13123 557 aaPredicted RBP14.3□□□□□ -0.12
USP8-209ENST00000560297 GRM4Q14833 912 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 TAF1CQ15572 869 aaPredicted RBP14.3□□□□□ -0.12
USP8-209ENST00000560297 BTNL9Q6UXG8 535 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 P2RX7Q99572 595 aaKnown RBP14.3□□□□□ -0.12
USP8-209ENST00000560297 LZTS2Q9BRK4 669 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
USP8-209ENST00000560297 NAP1L2Q9ULW6 460 aaPredicted RBP14.3□□□□□ -0.12
USP8-209ENST00000560297 KLRF2D3W0D1 207 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 PDIA3P30101 505 aaKnown RBP14.29□□□□□ -0.12
USP8-209ENST00000560297 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
USP8-209ENST00000560297 MCM2P49736 904 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 SMCR8Q8TEV9 937 aaPredicted RBP14.29□□□□□ -0.12
USP8-209ENST00000560297 CHMP4CQ96CF2 233 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 SLF1Q9BQI6 1058 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 CFHR5Q9BXR6 569 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
USP8-209ENST00000560297 RNF186Q9NXI6 227 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 MAD2L2Q9UI95 211 aa14.29□□□□□ -0.12
USP8-209ENST00000560297 PPP1R9AQ9ULJ8 1098 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms