RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 AFG3L2Q9Y4W6 797 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 SLC16A2P36021 539 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 HMGCS2P54868 508 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 HUNKP57058 714 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 NUCB2P80303 420 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 TMTC2Q8N394 836 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 RBM46Q8TBY0 533 aaKnown RBP13.49□□□□□ -0.25
TM2D3-208ENST00000559891 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 PHKBQ93100 1093 aa13.49□□□□□ -0.25
TM2D3-208ENST00000559891 RNF216Q9NWF9 866 aaPredicted RBP13.49□□□□□ -0.25
TM2D3-208ENST00000559891 HTRA3P83110 453 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
TM2D3-208ENST00000559891 FEZ1Q99689 392 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 NTRK3Q16288 839 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
TM2D3-208ENST00000559891 SLC10A4Q96EP9 437 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 DDX11Q96FC9 970 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
TM2D3-208ENST00000559891 SPDYE5A6NIY4 337 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 USP17L10C9JJH3 530 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 CYTH3O43739 400 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 MCM2P49736 904 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 BACE1P56817 501 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 SNAP25P60880 206 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 CUL4AQ13619 759 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 GRM4Q14833 912 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 RTN1Q16799 776 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 CCDC178Q5BJE1 867 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
TM2D3-208ENST00000559891 SYNE3Q6ZMZ3 975 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 WDR18Q9BV38 432 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 VCPKMTQ9H867 229 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 FBXO28Q9NVF7 368 aa13.47□□□□□ -0.25
TM2D3-208ENST00000559891 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
TM2D3-208ENST00000559891 DDAH1O94760 285 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 PTPRFP10586 1907 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 NT5C2P49902 561 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 FUT2Q10981 343 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 ERO1BQ86YB8 467 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 ZSCAN31Q96LW9 406 aaPredicted RBP13.46□□□□□ -0.25
TM2D3-208ENST00000559891 AIFM3Q96NN9 605 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 NAP1L5Q96NT1 182 aaPredicted RBP13.46□□□□□ -0.25
TM2D3-208ENST00000559891 PPP1R9BQ96SB3 815 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 KIAA1683Q9H0B3 1180 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 CWC22Q9HCG8 908 aaKnown RBP13.46□□□□□ -0.25
TM2D3-208ENST00000559891 VAT1LQ9HCJ6 419 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
TM2D3-208ENST00000559891 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.26
TM2D3-208ENST00000559891 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.26
TM2D3-208ENST00000559891 SLC1A4P43007 532 aa13.46□□□□□ -0.26
TM2D3-208ENST00000559891 ZNF543Q08ER8 600 aa13.46□□□□□ -0.26
TM2D3-208ENST00000559891 CCDC96Q2M329 555 aa13.46□□□□□ -0.26
TM2D3-208ENST00000559891 TREML2Q5T2D2 321 aa13.46□□□□□ -0.26
TM2D3-208ENST00000559891 NSUN7Q8NE18 718 aaKnown RBP13.46□□□□□ -0.26
TM2D3-208ENST00000559891 GMCL1P1Q8NEA9 526 aa13.46□□□□□ -0.26
TM2D3-208ENST00000559891 ZIC5Q96T25 663 aa13.46□□□□□ -0.26
TM2D3-208ENST00000559891 SH2B1Q9NRF2 756 aaPredicted RBP13.46□□□□□ -0.26
TM2D3-208ENST00000559891 DDX49Q9Y6V7 483 aaKnown RBP13.46□□□□□ -0.26
TM2D3-208ENST00000559891 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 PEX10O60683 326 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 VCAM1P19320 739 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 FOSBP53539 338 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 ZNF445P59923 1031 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 FKBP1BP68106 108 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 PPATQ06203 517 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 GRM1Q13255 1194 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 CTCFLQ8NI51 663 aaPredicted RBP13.45□□□□□ -0.26
TM2D3-208ENST00000559891 CEP350Q5VT06 3117 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 PARP1P09874 1014 aaKnown RBP13.45□□□□□ -0.26
TM2D3-208ENST00000559891 MOGSQ13724 837 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 TMTC3Q6ZXV5 915 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 AS3MTQ9HBK9 375 aa13.45□□□□□ -0.26
TM2D3-208ENST00000559891 ABT1Q9ULW3 272 aaKnown RBP13.45□□□□□ -0.26
TM2D3-208ENST00000559891 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
TM2D3-208ENST00000559891 TMEM232C9JQI7 657 aa13.44□□□□□ -0.26
TM2D3-208ENST00000559891 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
TM2D3-208ENST00000559891 ZNF157P51786 506 aaPredicted RBP13.44□□□□□ -0.26
TM2D3-208ENST00000559891 SHISA4Q96DD7 197 aa13.44□□□□□ -0.26
TM2D3-208ENST00000559891 WNK4Q96J92 1243 aa13.44□□□□□ -0.26
TM2D3-208ENST00000559891 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
TM2D3-208ENST00000559891 GINM1Q9NU53 330 aa13.44□□□□□ -0.26
TM2D3-208ENST00000559891 NID2Q14112 1375 aa13.44□□□□□ -0.26
TM2D3-208ENST00000559891 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 CPLX1O14810 134 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 BMP3P12645 472 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 GMCL1Q96IK5 515 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 MS4A4AQ96JQ5 239 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 SLC26A6Q9BXS9 759 aa13.43□□□□□ -0.26
TM2D3-208ENST00000559891 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms